NAMESPACE

importClassesFrom(HIV.db, HivFeature)
importMethodsFrom(HIV.db, getHXB2Coordinates,getName)

#importClassesFrom(pepStat, peptideSet)


importClassesFrom(GenomeGraphs, gdObject,GenomeAxis,GenericArray)
importFrom(GenomeGraphs, DisplayPars
			,makeSmoothing,makeSegmentation,makeGenericArray,makeRectangleOverlay
			,makeTitle)
importMethodsFrom(GenomeGraphs, getPar,drawGD,getSize,setPar)
import(IRanges)

#importClassesFrom(methods, character, integer, numeric)
#importMethodsFrom(methods, show)
#importFrom(methods, "@<-", new)



exportClasses(GenericAnno,PepAxis,ProbeSequence,GenericArray,gdObject,GenomeAxis)
exportMethods(drawGD
			,drawLegend
			,getProbeStart
			,show
			,getIndex
			,getAnnotations
			,isLegend
			,getNC
			,getIntensity
			,getProbeSequence)
			
export(pdPlot,makeGenericAnno,makePepAxis,makeProbeSequence,DisplayPars
		,makeSmoothing,makeSegmentation,makeGenericArray,makeRectangleOverlay
		,makeTitle)