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Vcf2Maf currently doens't work with VEP annotation #9

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FriederikeHanssen opened this issue Mar 13, 2024 · 0 comments
Open

Vcf2Maf currently doens't work with VEP annotation #9

FriederikeHanssen opened this issue Mar 13, 2024 · 0 comments
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@FriederikeHanssen
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Description of the bug

It is currently not possible to annotate VCF files with vcf2maf. This issue is raised already in the vcf2maf repo (mskcc/vcf2maf#335) . In the meantime, it is recommended to annotated the VCF files with VEP in nf-core/sarek and then supply them as input here.

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@FriederikeHanssen FriederikeHanssen added the bug Something isn't working label Mar 13, 2024
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@FriederikeHanssen