{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":608260138,"defaultBranch":"main","name":"bean_manuscript","ownerLogin":"pinellolab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-03-01T16:44:34.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/30343453?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1709509931.0","currentOid":""},"activityList":{"items":[{"before":"ae78abeaa0f2d1b6959ffcad7ae0e2cb40eea52a","after":"63dc7a8ac6bbb6b8b3611e640c70f0ee4e99b69a","ref":"refs/heads/main","pushedAt":"2024-04-25T02:53:38.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/pinellolab/bean_manuscript into main","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/pinellolab/bean_manuscript …"}},{"before":"51fc3082551af9fdaee64db29520d4e0a29e235a","after":"ae78abeaa0f2d1b6959ffcad7ae0e2cb40eea52a","ref":"refs/heads/main","pushedAt":"2024-04-13T19:47:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Update environment.yml","shortMessageHtmlLink":"Update environment.yml"}},{"before":"4c7a4aeabfbf73c0bd4ccde39e3072f02aa0ea0f","after":"51fc3082551af9fdaee64db29520d4e0a29e235a","ref":"refs/heads/main","pushedAt":"2024-03-03T23:51:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Add demultiplexing script","shortMessageHtmlLink":"Add demultiplexing script"}},{"before":"aaa6b97d7a1609412a52f862ea5122ec41fdd161","after":"4c7a4aeabfbf73c0bd4ccde39e3072f02aa0ea0f","ref":"refs/heads/main","pushedAt":"2023-11-09T20:42:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Delete workflow/notebooks/Suppl/fit_accessibility_parameters.ipynb","shortMessageHtmlLink":"Delete workflow/notebooks/Suppl/fit_accessibility_parameters.ipynb"}},{"before":"c2a49fb3bf2c00d0c816204d186bf89835fa6b10","after":"aaa6b97d7a1609412a52f862ea5122ec41fdd161","ref":"refs/heads/main","pushedAt":"2023-11-09T20:41:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"adding suppl notebooks","shortMessageHtmlLink":"adding suppl notebooks"}},{"before":"984be536259071461d5bc4c58d428a4335108951","after":"c2a49fb3bf2c00d0c816204d186bf89835fa6b10","ref":"refs/heads/main","pushedAt":"2023-11-09T18:46:19.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Merge branch 'notebooks' into main","shortMessageHtmlLink":"Merge branch 'notebooks' into main"}},{"before":"650a1f5f16fa9b65687f1bde73db6f174b36832a","after":"984be536259071461d5bc4c58d428a4335108951","ref":"refs/heads/main","pushedAt":"2023-08-28T00:17:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"update to working version","shortMessageHtmlLink":"update to working version"}},{"before":"c79f513302c186e999a5146c836dc3f0fefbf305","after":"650a1f5f16fa9b65687f1bde73db6f174b36832a","ref":"refs/heads/main","pushedAt":"2023-08-26T21:44:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"switch to no build","shortMessageHtmlLink":"switch to no build"}},{"before":"602a2644e64cfec80971812e1b8ebf8bfab5a536","after":"c79f513302c186e999a5146c836dc3f0fefbf305","ref":"refs/heads/main","pushedAt":"2023-08-26T21:29:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"update env with --from-history","shortMessageHtmlLink":"update env with --from-history"}},{"before":"0dc7ac99d1e4e48b8c313d6212266815af983315","after":"602a2644e64cfec80971812e1b8ebf8bfab5a536","ref":"refs/heads/main","pushedAt":"2023-08-26T20:48:10.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/pinellolab/bean_manuscript into main","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/pinellolab/bean_manuscript …"}},{"before":"b462c6cc62f6414e38b78dab8d8e7c562ec9fe98","after":"0dc7ac99d1e4e48b8c313d6212266815af983315","ref":"refs/heads/main","pushedAt":"2023-08-26T19:59:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"44e57eaaf8cfae435f957b563d4ca7e34a95f0df","after":"b462c6cc62f6414e38b78dab8d8e7c562ec9fe98","ref":"refs/heads/main","pushedAt":"2023-08-26T19:59:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"6c331abd9f191bb78289f7340cdfc990014e69ee","after":"44e57eaaf8cfae435f957b563d4ca7e34a95f0df","ref":"refs/heads/main","pushedAt":"2023-08-21T21:54:16.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"add accessibility file","shortMessageHtmlLink":"add accessibility file"}},{"before":"4c860cffaf7ddd199b5252387b35b8f2ef7e14aa","after":"6c331abd9f191bb78289f7340cdfc990014e69ee","ref":"refs/heads/main","pushedAt":"2023-08-19T18:29:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"adding editing preference notebooks","shortMessageHtmlLink":"adding editing preference notebooks"}},{"before":"2f6cf81cd8413f25b1c29b9e71af21545d86cfc5","after":"4c860cffaf7ddd199b5252387b35b8f2ef7e14aa","ref":"refs/heads/main","pushedAt":"2023-08-16T22:20:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Debugged PAM preference and update context logo","shortMessageHtmlLink":"Debugged PAM preference and update context logo"}},{"before":"0d7a908329240ec622711b6e9e90cef9eaed090a","after":"2f6cf81cd8413f25b1c29b9e71af21545d86cfc5","ref":"refs/heads/main","pushedAt":"2023-08-16T15:19:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"adding accessibility parameter fitting","shortMessageHtmlLink":"adding accessibility parameter fitting"}},{"before":"eec849dcd23e8deff8dab5c66be5dbbddf5d472c","after":"0d7a908329240ec622711b6e9e90cef9eaed090a","ref":"refs/heads/main","pushedAt":"2023-08-11T20:05:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"adding missing scripts","shortMessageHtmlLink":"adding missing scripts"}},{"before":"6395046fcf52c6b3731dfca2795c9c0698676315","after":"eec849dcd23e8deff8dab5c66be5dbbddf5d472c","ref":"refs/heads/main","pushedAt":"2023-06-15T19:44:49.969Z","pushType":"push","commitsCount":11,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"add input argument","shortMessageHtmlLink":"add input argument"}},{"before":"8670cd143e3a409e0595fe5a6c3dd48a1300e1b7","after":"6395046fcf52c6b3731dfca2795c9c0698676315","ref":"refs/heads/main","pushedAt":"2023-05-05T03:08:01.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Merge pull request #5 from pinellolab/CRISPhieRmix\n\nupdate CRISPhieRmix","shortMessageHtmlLink":"Merge pull request #5 from pinellolab/CRISPhieRmix"}},{"before":"70a0c45c0ef88437e9b2e555e738e84f7c746884","after":"8670cd143e3a409e0595fe5a6c3dd48a1300e1b7","ref":"refs/heads/main","pushedAt":"2023-05-04T21:49:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"ManuelTgn","name":"Manuel Tognon","path":"/ManuelTgn","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51021763?s=80&v=4"},"commit":{"message":"TF binding perturbation by SNP","shortMessageHtmlLink":"TF binding perturbation by SNP"}},{"before":"861c535e639cf6d33a85c30c74fbfddddf556e10","after":"1fb6093c9ea1e71bd630b041fc6a8933345178d2","ref":"refs/heads/CRISPhieRmix","pushedAt":"2023-05-04T18:16:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"lzj1769","name":"Zhijian Li","path":"/lzj1769","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9947922?s=80&v=4"},"commit":{"message":"update CRISPhieRmix","shortMessageHtmlLink":"update CRISPhieRmix"}},{"before":"26865bae22dd48ab8be79a1ffaa43cc0cb1cb5f8","after":"70a0c45c0ef88437e9b2e555e738e84f7c746884","ref":"refs/heads/main","pushedAt":"2023-05-04T03:29:36.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Merge pull request #4 from pinellolab/CRISPhieRmix\n\nadd CRISPhieRmix_LDLRCDS","shortMessageHtmlLink":"Merge pull request #4 from pinellolab/CRISPhieRmix"}},{"before":null,"after":"861c535e639cf6d33a85c30c74fbfddddf556e10","ref":"refs/heads/CRISPhieRmix","pushedAt":"2023-05-04T00:19:14.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"lzj1769","name":"Zhijian Li","path":"/lzj1769","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/9947922?s=80&v=4"},"commit":{"message":"add CRISPhieRmix_LDLRCDS","shortMessageHtmlLink":"add CRISPhieRmix_LDLRCDS"}},{"before":"c757861dae7d7f556f4d23c884b45ca383754223","after":"26865bae22dd48ab8be79a1ffaa43cc0cb1cb5f8","ref":"refs/heads/main","pushedAt":"2023-04-20T18:45:37.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"adding crisphiermix for evaluation","shortMessageHtmlLink":"adding crisphiermix for evaluation"}},{"before":null,"after":"c05af4b05b2df61ff0025a7f285edf3049fd2288","ref":"refs/heads/merge_benchmark","pushedAt":"2023-04-19T20:01:58.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/pinellolab/bean_manuscript into merge_benchmark\n\nConflicts:\n\tworkflow/scripts/run_models/run_CB2.R\n\tworkflow/scripts/run_models/run_CB2_var.sh","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/pinellolab/bean_manuscript …"}},{"before":"84fffab12f47957af52c799d02ba474e41085332","after":"c757861dae7d7f556f4d23c884b45ca383754223","ref":"refs/heads/main","pushedAt":"2023-04-18T19:52:49.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Merge pull request #3 from lzj1769/main\n\nadd CRISPhieRmix","shortMessageHtmlLink":"Merge pull request #3 from lzj1769/main"}},{"before":"0a180157052e320ed9d0c1641cb83328da98de7f","after":"84fffab12f47957af52c799d02ba474e41085332","ref":"refs/heads/main","pushedAt":"2023-03-28T16:38:06.913Z","pushType":"pr_merge","commitsCount":8,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Merge pull request #2 from pinellolab/initial_ver\n\nInitial ver","shortMessageHtmlLink":"Merge pull request #2 from pinellolab/initial_ver"}},{"before":"f1bfa85ee732aae0534a02328c47eeea6e3ef97f","after":"5e7459f7262e2417ff5333a8594094faebcd9f0c","ref":"refs/heads/initial_ver","pushedAt":"2023-03-28T16:37:48.054Z","pushType":"push","commitsCount":1,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"adding small resource files","shortMessageHtmlLink":"adding small resource files"}},{"before":"93542ff2fc02230092af81a6638855a6567ce407","after":"f1bfa85ee732aae0534a02328c47eeea6e3ef97f","ref":"refs/heads/initial_ver","pushedAt":"2023-03-28T16:22:19.387Z","pushType":"push","commitsCount":2,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"adding missing scripts","shortMessageHtmlLink":"adding missing scripts"}},{"before":"b2ad2d3b2b1f09110be24c145e258b9ba862e0b8","after":"93542ff2fc02230092af81a6638855a6567ce407","ref":"refs/heads/initial_ver","pushedAt":"2023-03-23T17:27:08.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jykr","name":"Jayoung Kim Ryu","path":"/jykr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28916368?s=80&v=4"},"commit":{"message":"Merge branch 'initial_ver' of https://github.com/pinellolab/bean_manuscript into initial_ver","shortMessageHtmlLink":"Merge branch 'initial_ver' of https://github.com/pinellolab/bean_manu…"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEObhwYAA","startCursor":null,"endCursor":null}},"title":"Activity · pinellolab/bean_manuscript"}