diff --git a/CRISPResso2/CRISPRessoShared.py b/CRISPResso2/CRISPRessoShared.py index 7ec411a6..3225540a 100644 --- a/CRISPResso2/CRISPRessoShared.py +++ b/CRISPResso2/CRISPRessoShared.py @@ -1737,7 +1737,7 @@ def get_crispresso_header(description, header_str): output_line = (pad_string + logo_lines[i].ljust(max_logo_width) + pad_string).center( term_width) + "\n" + output_line - output_line += '\n' + ('[CRISPResso version ' + __version__ + ']').center(term_width) + '\n' + format_cl_text( + output_line += '\n' + ('[CRISPResso version ' + __version__ + ']').center(term_width) + '\n' + ( '[Note that starting in version 2.3.0 FLASh and Trimmomatic will be replaced by fastp for read merging and trimming. Accordingly, the --flash_command and --trimmomatic_command parameters will be replaced with --fastp_command. Also, --trimmomatic_options_string will be replaced with --fastp_options_string.\n\nAlso in version 2.3.0, when running CRISPRessoPooled in mixed-mode (amplicon file and genome are provided) the default behavior will be as if the --demultiplex_only_at_amplicons parameter is provided. This change means that reads and amplicons do not need to align to the exact locations.]').center( term_width) + "\n" + ('[For support contact k.clement@utah.edu or support@edilytics.com]').center(term_width) + "\n"