/
NAMESPACE
65 lines (64 loc) · 1.5 KB
/
NAMESPACE
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# Generated by roxygen2 (4.1.1): do not edit by hand
S3method(bias_table,kallisto)
S3method(bias_table,sleuth)
S3method(get_bootstraps,kallisto)
S3method(get_bootstraps,sleuth)
S3method(head,kallisto)
S3method(models,sleuth)
S3method(models,sleuth_model)
S3method(plot_fld,kallisto)
S3method(plot_fld,sleuth)
S3method(print,kallisto)
S3method(print,sleuth)
S3method(print,sleuth_model)
S3method(summary,sleuth)
S3method(tests,sleuth)
export(basic_filter)
export(bias_table)
export(bs_sigma_summary)
export(counts_to_fpkm)
export(counts_to_tpm)
export(design_matrix)
export(enclosed_brush)
export(get_bootstraps)
export(get_quantile)
export(kallisto_table)
export(melt_bootstrap_sleuth)
export(models)
export(norm_factors)
export(plot_bootstrap)
export(plot_fld)
export(plot_group_density)
export(plot_loadings)
export(plot_ma)
export(plot_mean_var)
export(plot_pc_variance)
export(plot_pca)
export(plot_qq)
export(plot_sample_density)
export(plot_sample_heatmap)
export(plot_scatter)
export(plot_transcript_heatmap)
export(plot_vars)
export(plot_volcano)
export(read_kallisto)
export(read_kallisto_h5)
export(read_kallisto_tsv)
export(shrink_df)
export(sleuth_fit)
export(sleuth_gene_table)
export(sleuth_live)
export(sleuth_live_settings)
export(sleuth_lrt)
export(sleuth_prep)
export(sleuth_results)
export(sleuth_to_matrix)
export(sleuth_wt)
export(sliding_window_grouping)
export(tests)
export(tpm_to_alpha)
export(transcripts_from_gene)
import(dplyr)
importFrom(data.table,fread)
importFrom(lazyeval,interp)
importFrom(lazyeval,lazy)