{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":569371342,"defaultBranch":"main","name":"PyDESeq2","ownerLogin":"owkin","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-11-22T17:14:11.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/28560459?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1716284593.0","currentOid":""},"activityList":{"items":[{"before":"f12d587f8d59ebc8b588dc4740e59076735d062e","after":"9873f8a3a7e00acf2a21eaf488d81423d0896958","ref":"refs/heads/fix/fit_type","pushedAt":"2024-05-23T14:10:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"refactor: create a `vst_fit_type` attribute and store parameters fit within the VST pipeline with a \"vst_\" prefix","shortMessageHtmlLink":"refactor: create a vst_fit_type attribute and store parameters fit …"}},{"before":"9da5825362ceff3fc4fc790b97e17d49c9c0d025","after":null,"ref":"refs/heads/fix_beta_init","pushedAt":"2024-05-21T09:43:13.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"}},{"before":"7a4032d6cd0948184a477a2b21cc982501552147","after":"663225b6ee60082c17c04617b175cd2fb7c1a0c3","ref":"refs/heads/main","pushedAt":"2024-05-21T09:43:12.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"BUG initialize beta_init when the design matrix is not full rank (#281)","shortMessageHtmlLink":"BUG initialize beta_init when the design matrix is not full rank (#281)"}},{"before":null,"after":"9da5825362ceff3fc4fc790b97e17d49c9c0d025","ref":"refs/heads/fix_beta_init","pushedAt":"2024-05-16T08:27:20.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"fix: initialize beta_init when the design matrix is not full rank","shortMessageHtmlLink":"fix: initialize beta_init when the design matrix is not full rank"}},{"before":"27131c9766358f382fd7521a1691a4d0dc191098","after":null,"ref":"refs/heads/pre-commit-ci-update-config","pushedAt":"2024-05-14T07:03:32.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"}},{"before":"c00c7081b186f6cb2ad9fc789c997f689eaf8fd5","after":"7a4032d6cd0948184a477a2b21cc982501552147","ref":"refs/heads/main","pushedAt":"2024-05-14T07:03:31.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"[pre-commit.ci] pre-commit autoupdate (#279)\n\nupdates:\r\n- [github.com/astral-sh/ruff-pre-commit: v0.4.3 → v0.4.4](https://github.com/astral-sh/ruff-pre-commit/compare/v0.4.3...v0.4.4)\r\n\r\nCo-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>","shortMessageHtmlLink":"[pre-commit.ci] pre-commit autoupdate (#279)"}},{"before":null,"after":"27131c9766358f382fd7521a1691a4d0dc191098","ref":"refs/heads/pre-commit-ci-update-config","pushedAt":"2024-05-13T22:11:30.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"pre-commit-ci[bot]","name":null,"path":"/apps/pre-commit-ci","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/68672?s=80&v=4"},"commit":{"message":"[pre-commit.ci] pre-commit autoupdate\n\nupdates:\n- [github.com/astral-sh/ruff-pre-commit: v0.4.3 → v0.4.4](https://github.com/astral-sh/ruff-pre-commit/compare/v0.4.3...v0.4.4)","shortMessageHtmlLink":"[pre-commit.ci] pre-commit autoupdate"}},{"before":"3c4db09c853c15d5e92f02bb2b43bfff51ea63f4","after":null,"ref":"refs/heads/pre-commit-ci-update-config","pushedAt":"2024-05-07T08:23:37.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"}},{"before":"326df37bb15683d5450a31ce50392f2d8bf2beca","after":"c00c7081b186f6cb2ad9fc789c997f689eaf8fd5","ref":"refs/heads/main","pushedAt":"2024-05-07T08:23:36.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"[pre-commit.ci] pre-commit autoupdate (#278)\n\nupdates:\r\n- [github.com/astral-sh/ruff-pre-commit: v0.4.2 → v0.4.3](https://github.com/astral-sh/ruff-pre-commit/compare/v0.4.2...v0.4.3)\r\n\r\nCo-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>","shortMessageHtmlLink":"[pre-commit.ci] pre-commit autoupdate (#278)"}},{"before":null,"after":"3c4db09c853c15d5e92f02bb2b43bfff51ea63f4","ref":"refs/heads/pre-commit-ci-update-config","pushedAt":"2024-05-06T22:18:06.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"pre-commit-ci[bot]","name":null,"path":"/apps/pre-commit-ci","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/68672?s=80&v=4"},"commit":{"message":"[pre-commit.ci] pre-commit autoupdate\n\nupdates:\n- [github.com/astral-sh/ruff-pre-commit: v0.4.2 → v0.4.3](https://github.com/astral-sh/ruff-pre-commit/compare/v0.4.2...v0.4.3)","shortMessageHtmlLink":"[pre-commit.ci] pre-commit autoupdate"}},{"before":"ba37a81e258e87d43927c2a52f8612c369ecdcf7","after":null,"ref":"refs/heads/pre-commit-ci-update-config","pushedAt":"2024-04-30T07:44:37.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"}},{"before":"5cc9f294d81429d4424797ae669ef512781c49d6","after":"326df37bb15683d5450a31ce50392f2d8bf2beca","ref":"refs/heads/main","pushedAt":"2024-04-30T07:44:36.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"[pre-commit.ci] pre-commit autoupdate (#277)\n\nupdates:\r\n- [github.com/psf/black: 24.4.0 → 24.4.2](https://github.com/psf/black/compare/24.4.0...24.4.2)\r\n- [github.com/astral-sh/ruff-pre-commit: v0.4.1 → v0.4.2](https://github.com/astral-sh/ruff-pre-commit/compare/v0.4.1...v0.4.2)\r\n- [github.com/pre-commit/mirrors-mypy: v1.9.0 → v1.10.0](https://github.com/pre-commit/mirrors-mypy/compare/v1.9.0...v1.10.0)\r\n\r\nCo-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>","shortMessageHtmlLink":"[pre-commit.ci] pre-commit autoupdate (#277)"}},{"before":null,"after":"ba37a81e258e87d43927c2a52f8612c369ecdcf7","ref":"refs/heads/pre-commit-ci-update-config","pushedAt":"2024-04-29T22:41:54.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"pre-commit-ci[bot]","name":null,"path":"/apps/pre-commit-ci","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/68672?s=80&v=4"},"commit":{"message":"[pre-commit.ci] pre-commit autoupdate\n\nupdates:\n- [github.com/psf/black: 24.4.0 → 24.4.2](https://github.com/psf/black/compare/24.4.0...24.4.2)\n- [github.com/astral-sh/ruff-pre-commit: v0.4.1 → v0.4.2](https://github.com/astral-sh/ruff-pre-commit/compare/v0.4.1...v0.4.2)\n- [github.com/pre-commit/mirrors-mypy: v1.9.0 → v1.10.0](https://github.com/pre-commit/mirrors-mypy/compare/v1.9.0...v1.10.0)","shortMessageHtmlLink":"[pre-commit.ci] pre-commit autoupdate"}},{"before":"7e934338fd5c5b2dfd130785c37e8052f0cb4946","after":"f12d587f8d59ebc8b588dc4740e59076735d062e","ref":"refs/heads/fix/fit_type","pushedAt":"2024-04-26T13:09:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"laudmt","name":"Laura Dumont","path":"/laudmt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25728145?s=80&v=4"},"commit":{"message":"fix doc","shortMessageHtmlLink":"fix doc"}},{"before":"90c8517821247e4c420d80c947e60f1d6a3c04d1","after":"7e934338fd5c5b2dfd130785c37e8052f0cb4946","ref":"refs/heads/fix/fit_type","pushedAt":"2024-04-26T12:50:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"laudmt","name":"Laura Dumont","path":"/laudmt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25728145?s=80&v=4"},"commit":{"message":"fix typo and doc","shortMessageHtmlLink":"fix typo and doc"}},{"before":"24d0e5df255b0aec3daed7f5a2a4d277a1699e69","after":null,"ref":"refs/heads/v0.4.9","pushedAt":"2024-04-25T10:13:03.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"}},{"before":"44fa9591d322e337b739dc918d2875e36071cfb8","after":"5cc9f294d81429d4424797ae669ef512781c49d6","ref":"refs/heads/main","pushedAt":"2024-04-25T10:13:02.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"REL v0.4.9","shortMessageHtmlLink":"REL v0.4.9"}},{"before":null,"after":"24d0e5df255b0aec3daed7f5a2a4d277a1699e69","ref":"refs/heads/v0.4.9","pushedAt":"2024-04-25T10:06:39.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"chore: bump version number","shortMessageHtmlLink":"chore: bump version number"}},{"before":"11236559cfe23c0711ccce32a3a376e83cfd9227","after":null,"ref":"refs/heads/fix/refitted_trend_curve_dispersions","pushedAt":"2024-04-25T08:24:35.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"}},{"before":"171e422e6aaa1fcea713cdbde79e41a5187ec2f9","after":"44fa9591d322e337b739dc918d2875e36071cfb8","ref":"refs/heads/main","pushedAt":"2024-04-25T08:24:34.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"BUG update genewise dispersions and fitted dispersions of refitted genes (#274)","shortMessageHtmlLink":"BUG update genewise dispersions and fitted dispersions of refitted ge…"}},{"before":null,"after":"11236559cfe23c0711ccce32a3a376e83cfd9227","ref":"refs/heads/fix/refitted_trend_curve_dispersions","pushedAt":"2024-04-23T16:03:04.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"fix: update genewise dispersions and fitted dispersions of refitted genes","shortMessageHtmlLink":"fix: update genewise dispersions and fitted dispersions of refitted g…"}},{"before":"c13378373231050a675ad6097575d2281ac84cf0","after":"90c8517821247e4c420d80c947e60f1d6a3c04d1","ref":"refs/heads/fix/fit_type","pushedAt":"2024-04-23T08:13:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"chore: fix docstring format","shortMessageHtmlLink":"chore: fix docstring format"}},{"before":"92c17e222dea5d0cdf69f399c74804635369405e","after":null,"ref":"refs/heads/pre-commit-ci-update-config","pushedAt":"2024-04-23T07:41:47.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"}},{"before":"75b7f84fbe96a0c32c15f5fdf741f71568370613","after":"171e422e6aaa1fcea713cdbde79e41a5187ec2f9","ref":"refs/heads/main","pushedAt":"2024-04-23T07:41:46.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"},"commit":{"message":"[pre-commit.ci] pre-commit autoupdate (#273)\n\nupdates:\r\n- [github.com/astral-sh/ruff-pre-commit: v0.3.7 → v0.4.1](https://github.com/astral-sh/ruff-pre-commit/compare/v0.3.7...v0.4.1)\r\n\r\nCo-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>","shortMessageHtmlLink":"[pre-commit.ci] pre-commit autoupdate (#273)"}},{"before":null,"after":"92c17e222dea5d0cdf69f399c74804635369405e","ref":"refs/heads/pre-commit-ci-update-config","pushedAt":"2024-04-22T21:59:03.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"pre-commit-ci[bot]","name":null,"path":"/apps/pre-commit-ci","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/68672?s=80&v=4"},"commit":{"message":"[pre-commit.ci] pre-commit autoupdate\n\nupdates:\n- [github.com/astral-sh/ruff-pre-commit: v0.3.7 → v0.4.1](https://github.com/astral-sh/ruff-pre-commit/compare/v0.3.7...v0.4.1)","shortMessageHtmlLink":"[pre-commit.ci] pre-commit autoupdate"}},{"before":"17acdf55a7710e984254758a4b342b42355856e4","after":"c13378373231050a675ad6097575d2281ac84cf0","ref":"refs/heads/fix/fit_type","pushedAt":"2024-04-19T15:53:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"laudmt","name":"Laura Dumont","path":"/laudmt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25728145?s=80&v=4"},"commit":{"message":"fix doc","shortMessageHtmlLink":"fix doc"}},{"before":"e2b8eadcfb94f9a269b149e7a8acd795774619e6","after":"17acdf55a7710e984254758a4b342b42355856e4","ref":"refs/heads/fix/fit_type","pushedAt":"2024-04-19T15:24:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"laudmt","name":"Laura Dumont","path":"/laudmt","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/25728145?s=80&v=4"},"commit":{"message":"update fit_type handling","shortMessageHtmlLink":"update fit_type handling"}},{"before":"123c34caee49c9e3ddb0affdf6d6044a7aeee0e1","after":"e651084b5b251dad069f4d8eb32aa8da60230858","ref":"refs/heads/khaliljean/interactions","pushedAt":"2024-04-19T12:09:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jeandut","name":null,"path":"/jeandut","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11030901?s=80&v=4"},"commit":{"message":"fixing the contrast part","shortMessageHtmlLink":"fixing the contrast part"}},{"before":"51da560ad4de401efd587203c61609dca426fc0b","after":"123c34caee49c9e3ddb0affdf6d6044a7aeee0e1","ref":"refs/heads/khaliljean/interactions","pushedAt":"2024-04-19T11:49:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jeandut","name":null,"path":"/jeandut","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11030901?s=80&v=4"},"commit":{"message":"fixing the contrast part","shortMessageHtmlLink":"fixing the contrast part"}},{"before":"cdb22b25343f1ca698eb82a199c45a823c290a8e","after":null,"ref":"refs/heads/pre-commit-ci-update-config","pushedAt":"2024-04-16T07:53:16.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"BorisMuzellec","name":"Boris Muzellec","path":"/BorisMuzellec","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/11092154?s=80&v=4"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEUhjtowA","startCursor":null,"endCursor":null}},"title":"Activity · owkin/PyDESeq2"}