{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"DISSECT","owner":"imsb-uke","isFork":false,"description":"Deep semi-supervised complete cell deconvolution <a href=\"https://imsb-uke.github.io/DISSECT/\" rel=\"nofollow\">https://imsb-uke.github.io/DISSECT/</a>","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":1,"starsCount":1,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-17T12:29:04.111Z"}},{"type":"Public","name":"epigenetic-neural-glioblastoma","owner":"imsb-uke","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-17T12:28:40.483Z"}},{"type":"Public","name":"ANCA-GN_transcriptomics","owner":"imsb-uke","isFork":false,"description":"Contains code to analyse ANCA data ","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-16T11:27:05.414Z"}},{"type":"Public","name":"MAXOMOD_Pipeline","owner":"imsb-uke","isFork":false,"description":"Reproducible analysis pipeline for the MAXOMOD project: Multiomic ALS signatures highlight sex differences and molecular subclusters and identify the MAPK pathway as therapeutic target","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":3,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-29T06:09:40.149Z"}},{"type":"Public","name":"scGAN","owner":"imsb-uke","isFork":false,"description":"Realistic in silico generation and augmentation of single cell RNA-seq data using Generative Adversarial Neural Networks","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":73,"forksCount":25,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-28T09:07:06.243Z"}},{"type":"Public","name":"discern","owner":"imsb-uke","isFork":false,"description":"Deep Single Cell Expression ReconstructioN for improved cell clustering and cell subtype and state detection","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":3,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-07T10:54:08.822Z"}},{"type":"Public","name":"deconvolution","owner":"imsb-uke","isFork":false,"description":"Runs deconvolution methods included in the DISSECT manuscript","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-05T09:38:26.830Z"}},{"type":"Public","name":"TCRs-pMHC","owner":"imsb-uke","isFork":false,"description":"Datasets containing CDR3 Beta sequences and peptide sequences, with a true label indication whether the combination binds or not.","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-11T08:22:36.402Z"}},{"type":"Public","name":"exsrrf_analyses","owner":"imsb-uke","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-04T06:28:20.662Z"}},{"type":"Public","name":"DeePSC","owner":"imsb-uke","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-10-20T17:35:53.655Z"}},{"type":"Public","name":"dcsurv","owner":"imsb-uke","isFork":false,"description":"Discrete Calibrated Survival","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-06-23T10:08:19.919Z"}},{"type":"Public","name":"ecarenet","owner":"imsb-uke","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":4,"forksCount":2,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-11-24T06:30:34.473Z"}},{"type":"Public","name":"rna_augment","owner":"imsb-uke","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":1,"issueCount":1,"starsCount":1,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-08-28T11:13:12.815Z"}},{"type":"Public","name":"bias-transfer-microscopy","owner":"imsb-uke","isFork":false,"description":"A repository containing the code for the paper \"Deep learning-based bias transfer for medical immunofluorescent microscopy images\"","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-08-03T08:52:50.438Z"}},{"type":"Public","name":"podometric_u_net","owner":"imsb-uke","isFork":false,"description":"Deep learning-based molecular morphometrics for kidney biopsies","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-12-23T15:26:14.033Z"}},{"type":"Public","name":"scaden","owner":"imsb-uke","isFork":true,"description":"Repository of the Scaden tool for cell type deconvolution of RNA-seq data.","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":24,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-03-10T16:13:47.667Z"}}],"repositoryCount":16,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}