{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"cogent3","owner":"cogent3","isFork":false,"description":"Comparative Genomics Toolkit 3","topicNames":["data-science","bioinformatics","statistics","genomics","biology","evolution","signal-processing","parallel","markov-chain","phylogenetic-trees"],"topicsNotShown":9,"allTopics":["data-science","bioinformatics","statistics","genomics","biology","evolution","signal-processing","parallel","markov-chain","phylogenetic-trees","biopython","phylogenetics","molecular-evolution","maximum-likelihood","sequence-alignment","non-stationary","biological-sequence-analysis","pycogent","python"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":2,"issueCount":52,"starsCount":95,"forksCount":53,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-28T08:06:26.269Z"}},{"type":"Public","name":"EnsemblLite","owner":"cogent3","isFork":true,"description":"A new approach to obtaining local copies of ensembl data","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":13,"starsCount":20,"forksCount":20,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-24T06:19:16.095Z"}},{"type":"Public","name":"SMBE2024Workshop","owner":"cogent3","isFork":false,"description":"Material for SMBE 2024","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-22T21:49:07.074Z"}},{"type":"Public","name":"cogent3.github.io","owner":"cogent3","isFork":false,"description":"Contents for cogent3.org","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Dockerfile","color":"#384d54"},"pullRequestCount":0,"issueCount":5,"starsCount":1,"forksCount":5,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-07T22:23:51.831Z"}},{"type":"Public","name":"bioconda-recipes","owner":"cogent3","isFork":true,"description":"Conda recipes for the bioconda channel.","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3069,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-07T10:03:07.340Z"}},{"type":"Public","name":"PiQTree2","owner":"cogent3","isFork":true,"description":"a python front end for IQ-TREE2 (software for efficient phylogenomic software by maximum likelihood <a href=\"http://www.iqtree.org\" rel=\"nofollow\">http://www.iqtree.org</a>)","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":1,"issueCount":6,"starsCount":0,"forksCount":50,"license":"GNU General Public License v2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-15T23:43:41.272Z"}},{"type":"Public","name":"ensembldb3","owner":"cogent3","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":3,"starsCount":9,"forksCount":20,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-29T22:18:33.556Z"}},{"type":"Public","name":"Cogent3Workshop","owner":"cogent3","isFork":false,"description":"Materials for the Phylomania workshop","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":22,"starsCount":8,"forksCount":5,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-21T01:51:12.302Z"}},{"type":"Public","name":"c3dev","owner":"cogent3","isFork":false,"description":"cogent3 developer tools","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Dockerfile","color":"#384d54"},"pullRequestCount":0,"issueCount":14,"starsCount":5,"forksCount":9,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-20T03:33:03.424Z"}},{"type":"Public","name":"PiQTree2dev","owner":"cogent3","isFork":false,"description":"Details for building development containers for PiQTree2 projects","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":3,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-26T19:57:47.393Z"}},{"type":"Public","name":"iqtree2","owner":"cogent3","isFork":true,"description":"NEW location of IQ-TREE software for efficient phylogenomic software by maximum likelihood <a href=\"http://www.iqtree.org\" rel=\"nofollow\">http://www.iqtree.org</a>","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":0,"issueCount":10,"starsCount":1,"forksCount":50,"license":"GNU General Public License v2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-12T22:22:08.931Z"}},{"type":"Public","name":"czi-project","owner":"cogent3","isFork":false,"description":"alpha project name of integrating graphbin, iqtree an cogent3","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-06-14T02:46:40.736Z"}},{"type":"Public","name":"homologsampler","owner":"cogent3","isFork":false,"description":"","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-12-13T23:53:03.034Z"}},{"type":"Public","name":"c3test","owner":"cogent3","isFork":false,"description":"for testing doc build to GH pages","topicNames":[],"topicsNotShown":0,"allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-05-19T00:03:11.506Z"}}],"repositoryCount":14,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}