{"payload":{"pageCount":2,"repositories":[{"type":"Public","name":"matlab-compiler-runtime","owner":"bids-apps","isFork":false,"description":"Base image with Matlab Compiler Runtime (MCR)","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":1,"starsCount":2,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-03T21:05:26.889Z"}},{"type":"Public","name":"giga_connectome","owner":"bids-apps","isFork":false,"description":"generate connectome from fMRIPrep outputs","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":14,"starsCount":3,"forksCount":4,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-03T15:52:30.066Z"}},{"type":"Public template","name":"example","owner":"bids-apps","isFork":false,"description":"This an example app that can serve as a template.","allTopics":["bids","bids-apps"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":3,"starsCount":16,"forksCount":31,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-28T12:26:18.102Z"}},{"type":"Public","name":"bids-apps.github.io","owner":"bids-apps","isFork":false,"description":"Portable neuroimaging pipelines that understand BIDS datasets","allTopics":["neuroimaging","bids"],"primaryLanguage":{"name":"CSS","color":"#563d7c"},"pullRequestCount":0,"issueCount":10,"starsCount":3,"forksCount":16,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-09T19:01:52.896Z"}},{"type":"Public","name":"PyMVPA","owner":"bids-apps","isFork":false,"description":"runs MVPA and RSA analysis BIDS bold derivative data","allTopics":["bids","mvpa","similarity-analysis","bidsapp","multivariate-pattern-analysis"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":2,"issueCount":3,"starsCount":7,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-07T23:26:03.091Z"}},{"type":"Public","name":"baracus","owner":"bids-apps","isFork":false,"description":"Predicts brain age, based on data from Freesurfer 5.3","allTopics":["bids","bidsapp"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":5,"starsCount":9,"forksCount":9,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:50:00.086Z"}},{"type":"Public","name":"SyntheticDiffusion","owner":"bids-apps","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":1,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:49:56.790Z"}},{"type":"Public","name":"DPARSF","owner":"bids-apps","isFork":false,"description":"Docker version of DPARSF, also deployed at OpenNeuro.org","allTopics":[],"primaryLanguage":{"name":"MATLAB","color":"#e16737"},"pullRequestCount":1,"issueCount":2,"starsCount":3,"forksCount":4,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:49:53.664Z"}},{"type":"Public","name":"BrainSuite","owner":"bids-apps","isFork":false,"description":"BrainSuite's structural, diffusion, and functional MRI processing pipelines with QC functionalities. ","allTopics":["mri","bids","bidsapp","mri-analysis"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":8,"forksCount":3,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:49:50.367Z"}},{"type":"Public","name":"BROCCOLI","owner":"bids-apps","isFork":false,"description":"BIDS App for BROCCOLI","allTopics":["mri","bids","bidsapp"],"primaryLanguage":{"name":"Dockerfile","color":"#384d54"},"pullRequestCount":0,"issueCount":5,"starsCount":5,"forksCount":1,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:49:47.508Z"}},{"type":"Public","name":"BRAINSAutoworkup","owner":"bids-apps","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:49:44.892Z"}},{"type":"Public","name":"dockerfile-templates","owner":"bids-apps","isFork":false,"description":"Dockerfile templates commonly used in BIDS Apps","allTopics":[],"primaryLanguage":{"name":"Dockerfile","color":"#384d54"},"pullRequestCount":0,"issueCount":2,"starsCount":10,"forksCount":7,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:48:26.145Z"}},{"type":"Public","name":"freesurfer","owner":"bids-apps","isFork":false,"description":"BIDS app wrapping recon-all from FreeSurfer","allTopics":["mri","preprocessing","bids","anatomical-mri","bidsapp"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":12,"starsCount":40,"forksCount":34,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:48:18.471Z"}},{"type":"Public","name":"base_validator","owner":"bids-apps","isFork":false,"description":"","allTopics":["bids"],"primaryLanguage":{"name":"Dockerfile","color":"#384d54"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":2,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:48:11.929Z"}},{"type":"Public","name":"hyperalignment","owner":"bids-apps","isFork":false,"description":"Hyperalignment is a functional alignment method that aligns subjects' brain data in a high-dimensional space of voxels/features.","allTopics":["bids","bidsapp"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":12,"forksCount":7,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:48:01.538Z"}},{"type":"Public","name":"QAP","owner":"bids-apps","isFork":false,"description":"PCP Quality Assessment Protocol","allTopics":["quality-control","bids","bidsapp"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":3,"issueCount":6,"starsCount":5,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:47:50.283Z"}},{"type":"Public","name":"MAGeTbrain","owner":"bids-apps","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":3,"starsCount":2,"forksCount":5,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:47:40.327Z"}},{"type":"Public","name":"antsCorticalThickness","owner":"bids-apps","isFork":false,"description":"BIDS App for calculating cortical thickness using ANTs","allTopics":["bids","bidsapp"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":2,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:47:35.372Z"}},{"type":"Public","name":"afni_proc","owner":"bids-apps","isFork":false,"description":"prototype AFNI bids app implmenting participant level preprocessing with afni_proc.py","allTopics":["mri","preprocessing","bids","bidsap"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":1,"issueCount":4,"starsCount":2,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:47:23.740Z"}},{"type":"Public","name":"SnPM","owner":"bids-apps","isFork":false,"description":"BIDS App containing an instance of the SnPM software.","allTopics":["spm","bids","bidsapp"],"primaryLanguage":{"name":"MATLAB","color":"#e16737"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:47:21.609Z"}},{"type":"Public","name":"SPM","owner":"bids-apps","isFork":false,"description":"BIDS App containing an instance of the SPM software.","allTopics":["spm","bids","bidsapp"],"primaryLanguage":{"name":"MATLAB","color":"#e16737"},"pullRequestCount":7,"issueCount":4,"starsCount":14,"forksCount":11,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:47:16.786Z"}},{"type":"Public","name":"CPAC","owner":"bids-apps","isFork":false,"description":"BIDS Application for the Configurable Pipeline for the Analysis of Connectomes (C-PAC)","allTopics":["mri","preprocessing","bids","bidsapp"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":10,"starsCount":14,"forksCount":18,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:46:26.285Z"}},{"type":"Public","name":"ndmg","owner":"bids-apps","isFork":false,"description":"BIDS app for NeuroData's MRI to Graphs pipeline","allTopics":["docker-container","bids","singularity-container","connectomics","diffusion-mri","bidsapp"],"primaryLanguage":{"name":"Dockerfile","color":"#384d54"},"pullRequestCount":0,"issueCount":2,"starsCount":5,"forksCount":8,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:46:21.638Z"}},{"type":"Public","name":"tracula","owner":"bids-apps","isFork":false,"description":"implements Freesurfer's TRACULA (TRActs Constrained by UnderLying Anatomy) tool for cross-sectional as well as longitudinal (multi session) input data.","allTopics":["bids","diffusion-mri","bidsapp"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":1,"starsCount":3,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:46:20.619Z"}},{"type":"Public","name":"rs_signal_extract","owner":"bids-apps","isFork":false,"description":"BIDS App for resting state signal extraction using nilearn.","allTopics":["bids","resting-state-fmri","bidsapp"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":1,"starsCount":6,"forksCount":6,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:46:03.099Z"}},{"type":"Public","name":"base_fsl","owner":"bids-apps","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Dockerfile","color":"#384d54"},"pullRequestCount":0,"issueCount":1,"starsCount":2,"forksCount":1,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:45:57.456Z"}},{"type":"Public","name":"oppni","owner":"bids-apps","isFork":false,"description":"runs fast optimization of preprocessing pipelines for BOLD fMRI","allTopics":["mri","bids","bidsapp","functional-mri"],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":7,"starsCount":5,"forksCount":3,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:45:55.446Z"}},{"type":"Public","name":"mindboggle","owner":"bids-apps","isFork":false,"description":"Improve the accuracy, precision, and consistency of automated labeling and shape analysis of human brain image data","allTopics":["mri","bids","bidsapp"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":9,"starsCount":3,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:45:51.573Z"}},{"type":"Public","name":"maintenance-tools","owner":"bids-apps","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":5,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:45:39.249Z"}},{"type":"Public","name":"brainiak-srm","owner":"bids-apps","isFork":false,"description":"This is the BIDS-app version of the Shared Response Model (SRM) of BrainIAK","allTopics":["bids","bidsapp"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":3,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-30T09:43:48.760Z"}}],"repositoryCount":42,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}