{"payload":{"pageCount":3,"repositories":[{"type":"Public","name":"Aliro","owner":"EpistasisLab","isFork":false,"description":"Aliro: AI-Driven Data Science","allTopics":["aiml","alzheimers-disease","automl","alzheimer","alzheimers","nia","adsp","ag066833","u01ag066833"],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":32,"issueCount":58,"starsCount":222,"forksCount":63,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-05T00:43:29.103Z"}},{"type":"Public","name":"PAGER","owner":"EpistasisLab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-03T22:54:00.621Z"}},{"type":"Public","name":"KRAGEN","owner":"EpistasisLab","isFork":false,"description":"Software to implement GoT with a weviate vectorized database","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":16,"starsCount":464,"forksCount":25,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-30T17:16:39.746Z"}},{"type":"Public","name":"tpot2","owner":"EpistasisLab","isFork":false,"description":"A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming. ","allTopics":["data-science","machine-learning","automation","random-forest","scikit-learn","aiml","model-selection","hyperparameter-optimization","feature-engineering","automl","gradient-boosting","automated-machine-learning","parameter-tuning","alzheimer","alzheimers","nia","adsp","ag066833","lm010098","python"],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":44,"starsCount":156,"forksCount":22,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-24T23:52:00.680Z"}},{"type":"Public","name":"STAR_outliers","owner":"EpistasisLab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-18T00:35:41.640Z"}},{"type":"Public","name":"tpot","owner":"EpistasisLab","isFork":false,"description":"A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming.","allTopics":["automation","aiml","model-selection","hyperparameter-optimization","gradient-boosting","automated-machine-learning","parameter-tuning","alzheimer","alzheimers","nia","adsp","ag066833","u01ag066833","python","data-science","machine-learning","random-forest","scikit-learn","feature-engineering","automl"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":11,"issueCount":279,"starsCount":9545,"forksCount":1548,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-15T17:55:00.923Z"}},{"type":"Public","name":"tpot2_imputetest","owner":"EpistasisLab","isFork":true,"description":"Testing complex imputation methods on a Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming. ","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":22,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-01T06:23:44.868Z"}},{"type":"Public","name":"tpot2-feedstock","owner":"EpistasisLab","isFork":true,"description":"A conda-smithy repository for tpot2.","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":4,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-24T18:38:16.577Z"}},{"type":"Public","name":"GPT4_and_Review","owner":"EpistasisLab","isFork":false,"description":"Using GPT-4 to write a scientific review article: a pilot evaluation study","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-10T18:51:10.505Z"}},{"type":"Public","name":"autoqtl","owner":"EpistasisLab","isFork":false,"description":"Automated Quantitative Trait Locus Analysis (AutoQTL)","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":7,"forksCount":3,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-05T22:12:03.565Z"}},{"type":"Public","name":"epistasis_detection","owner":"EpistasisLab","isFork":false,"description":"Implementation of an efficient algorithm to compute linear regression models for epistasis that permit varied genetic encodings (penetrance functions) of the interactions of loci and provide statistical evidence for epistasis.","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-29T19:38:35.241Z"}},{"type":"Public","name":"AlzKB","owner":"EpistasisLab","isFork":false,"description":"","allTopics":["aiml","alzheimers-disease","automl","alzheimer","alzheimers","nia","adsp","ag066833","u01ag066833"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":4,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-30T19:57:41.215Z"}},{"type":"Public","name":"EBIC.jl","owner":"EpistasisLab","isFork":false,"description":"EBIC - a biclustering algorithm in Julia","allTopics":[],"primaryLanguage":{"name":"Julia","color":"#a270ba"},"pullRequestCount":0,"issueCount":0,"starsCount":7,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-24T18:27:43.675Z"}},{"type":"Public","name":"aliroed-pi-gen","owner":"EpistasisLab","isFork":true,"description":"Tool used to create the AliroEd Raspberry Pi OS images","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1583,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-11T23:43:31.889Z"}},{"type":"Public","name":"pmlb","owner":"EpistasisLab","isFork":false,"description":"PMLB: A large, curated repository of benchmark datasets for evaluating supervised machine learning algorithms.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":15,"starsCount":789,"forksCount":129,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-26T16:32:11.375Z"}},{"type":"Public","name":"pmlbr","owner":"EpistasisLab","isFork":true,"description":"pmlb is an R interface to the Penn Machine Learning Benchmarks data repository","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":8,"forksCount":2,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-28T23:59:20.026Z"}},{"type":"Public","name":"PSB2024_spine","owner":"EpistasisLab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-25T20:38:32.210Z"}},{"type":"Public","name":"latent_phenotype_project","owner":"EpistasisLab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-15T18:54:29.572Z"}},{"type":"Public","name":"tpot2_gptp_experiments","owner":"EpistasisLab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-07-31T16:06:26.983Z"}},{"type":"Public","name":"scikit-mdr","owner":"EpistasisLab","isFork":false,"description":"A sklearn-compatible Python implementation of Multifactor Dimensionality Reduction (MDR) for feature construction.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":11,"starsCount":125,"forksCount":26,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-06-14T17:41:37.099Z"}},{"type":"Public","name":"tpot2-test","owner":"EpistasisLab","isFork":true,"description":"A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming. ","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":22,"license":"GNU Lesser General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-31T22:42:37.632Z"}},{"type":"Public","name":"STAR_outliers_figure_and_table_generation","owner":"EpistasisLab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-14T18:09:40.874Z"}},{"type":"Public","name":"exploration-trie-tpot","owner":"EpistasisLab","isFork":false,"description":"Comparison of evolutionary algorithms within TPOT using a trie to determine their exploratory nature","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-03-08T23:21:27.484Z"}},{"type":"Public","name":"scikit-rebate","owner":"EpistasisLab","isFork":false,"description":"A scikit-learn-compatible Python implementation of ReBATE, a suite of Relief-based feature selection algorithms for Machine Learning.","allTopics":["python","data-science","feature-selection"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":3,"issueCount":15,"starsCount":401,"forksCount":72,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-02-10T06:20:14.576Z"}},{"type":"Public","name":"aliro-imager","owner":"EpistasisLab","isFork":true,"description":"","allTopics":[],"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":232,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-01-13T18:54:02.613Z"}},{"type":"Public","name":"DTox","owner":"EpistasisLab","isFork":false,"description":"A knowledge-guided deep learning model for prediction and interpretation of drug toxicity","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":4,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-10-13T16:41:00.319Z"}},{"type":"Public","name":"digen","owner":"EpistasisLab","isFork":false,"description":"Diverse and generative ML benchmarks","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":1,"starsCount":14,"forksCount":3,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-08-09T20:17:50.477Z"}},{"type":"Public","name":"TTox","owner":"EpistasisLab","isFork":true,"description":"Develop and evaluate a feature selection pipeline for the identification of toxicity targets","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-06-16T20:49:55.916Z"}},{"type":"Public","name":"SAFE","owner":"EpistasisLab","isFork":false,"description":"The SAFE Algorithm: Solution and Fitness Evolution","allTopics":["python","automation","evolutionary-algorithms","coevoluton"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":4,"forksCount":5,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-06-09T10:02:55.013Z"}},{"type":"Public","name":"Conservation-Machine-Learning","owner":"EpistasisLab","isFork":false,"description":"Conservation Machine Learning","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-06-09T09:58:54.684Z"}}],"repositoryCount":72,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}