{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":84987624,"defaultBranch":"master","name":"oncokb-annotator","ownerLogin":"oncokb","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2017-03-14T19:12:12.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/22530657?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1707951321.0","currentOid":""},"activityList":{"items":[{"before":"3d9252ef68bfca246ac3962da35a596c7aa59971","after":"4427d91f93c86d7024cd61bc78ca015fc59ce841","ref":"refs/heads/master","pushedAt":"2024-02-14T22:51:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Update action files to align the version level to patch","shortMessageHtmlLink":"Update action files to align the version level to patch"}},{"before":"b3c8f0f4a5450467020355aa0b7d054bab37a58d","after":"3d9252ef68bfca246ac3962da35a596c7aa59971","ref":"refs/heads/master","pushedAt":"2024-02-14T22:51:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Update .version-level","shortMessageHtmlLink":"Update .version-level"}},{"before":"879c9c4b73d8893b47210743214bd1637e5ed475","after":null,"ref":"refs/heads/update-clinical-header","pushedAt":"2024-02-14T22:22:42.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"}},{"before":"77b8e63f92ba1376b5771d9c6c2560dd3ab5852b","after":"b3c8f0f4a5450467020355aa0b7d054bab37a58d","ref":"refs/heads/master","pushedAt":"2024-02-14T22:22:37.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Merge pull request #215 from oncokb/update-clinical-header\n\nSupport Tumor_Sample_Barcode as column name in clinical file","shortMessageHtmlLink":"Merge pull request #215 from oncokb/update-clinical-header"}},{"before":null,"after":"879c9c4b73d8893b47210743214bd1637e5ed475","ref":"refs/heads/update-clinical-header","pushedAt":"2024-02-14T22:07:05.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Support Tumor_Sample_Barcode as column name in clinical file","shortMessageHtmlLink":"Support Tumor_Sample_Barcode as column name in clinical file"}},{"before":"5ec3307fdbaa19ce1837b0b789cdbabd35690998","after":"1db143a3eca63e04d53ccd60d2133dc3766ec45d","ref":"refs/heads/add-driver-gene-columns","pushedAt":"2024-02-08T18:34:02.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Update AnnotatorCore.py","shortMessageHtmlLink":"Update AnnotatorCore.py"}},{"before":"11d262de85c892d95fd55087a953f2417cf22f07","after":"77b8e63f92ba1376b5771d9c6c2560dd3ab5852b","ref":"refs/heads/master","pushedAt":"2023-12-08T14:04:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"cfbe173b39d76c05e07cf3b9acf8d51f5fbf3c51","after":null,"ref":"refs/heads/dependabot/pip/requirements/requests-2.31.0","pushedAt":"2023-11-14T23:20:22.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"}},{"before":"95b74b4494f5d5e552247428c8f5618e899353b7","after":"11d262de85c892d95fd55087a953f2417cf22f07","ref":"refs/heads/master","pushedAt":"2023-11-14T23:20:17.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Merge pull request #200 from oncokb/dependabot/pip/requirements/requests-2.31.0\n\nBump requests from 2.27.1 to 2.31.0 in /requirements","shortMessageHtmlLink":"Merge pull request #200 from oncokb/dependabot/pip/requirements/reque…"}},{"before":"8ffadff60a86ddf09b82ecaa0b6594e936bd367e","after":"cfbe173b39d76c05e07cf3b9acf8d51f5fbf3c51","ref":"refs/heads/dependabot/pip/requirements/requests-2.31.0","pushedAt":"2023-11-14T23:17:41.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Bump requests from 2.27.1 to 2.31.0 in /requirements\n\nBumps [requests](https://github.com/psf/requests) from 2.27.1 to 2.31.0.\n- [Release notes](https://github.com/psf/requests/releases)\n- [Changelog](https://github.com/psf/requests/blob/main/HISTORY.md)\n- [Commits](https://github.com/psf/requests/compare/v2.27.1...v2.31.0)\n\n---\nupdated-dependencies:\n- dependency-name: requests\n dependency-type: direct:production\n...\n\nSigned-off-by: dependabot[bot] ","shortMessageHtmlLink":"Bump requests from 2.27.1 to 2.31.0 in /requirements"}},{"before":"cd2f926d52e1e2dd7d368b08e1f0b3966ae0eb83","after":"95b74b4494f5d5e552247428c8f5618e899353b7","ref":"refs/heads/master","pushedAt":"2023-11-14T23:15:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Update action files to align the version level to minor","shortMessageHtmlLink":"Update action files to align the version level to minor"}},{"before":"5e2ef8835c53b37332bc4836475d907bbf1c2e69","after":null,"ref":"refs/heads/rc","pushedAt":"2023-11-14T23:15:36.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"}},{"before":"e5ef4c2759dad078d108c1b0dc6ab2c6dce33280","after":"cd2f926d52e1e2dd7d368b08e1f0b3966ae0eb83","ref":"refs/heads/master","pushedAt":"2023-11-14T23:15:33.000Z","pushType":"pr_merge","commitsCount":8,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Merge pull request #210 from oncokb/rc\n\nAdd option to include descriptions & Add additional columns when annotating genomic change","shortMessageHtmlLink":"Merge pull request #210 from oncokb/rc"}},{"before":"2da5c45a32edda6d2362d562909f344930f6996d","after":"5e2ef8835c53b37332bc4836475d907bbf1c2e69","ref":"refs/heads/rc","pushedAt":"2023-11-14T23:12:01.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Update tests & Format code","shortMessageHtmlLink":"Update tests & Format code"}},{"before":"a38a72fc16f453a0343d947e959bee4692c237f6","after":"2da5c45a32edda6d2362d562909f344930f6996d","ref":"refs/heads/rc","pushedAt":"2023-11-14T23:07:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Update flake8.ini","shortMessageHtmlLink":"Update flake8.ini"}},{"before":"2c451a7c2f0087a71007ba18b0e091106c8b910e","after":"a38a72fc16f453a0343d947e959bee4692c237f6","ref":"refs/heads/rc","pushedAt":"2023-11-14T23:03:45.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Update test_Annotation.py","shortMessageHtmlLink":"Update test_Annotation.py"}},{"before":"92226c352f9ce51843d540c2731fc2211cc6909c","after":"2c451a7c2f0087a71007ba18b0e091106c8b910e","ref":"refs/heads/rc","pushedAt":"2023-11-14T23:02:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Update AnnotatorCore.py","shortMessageHtmlLink":"Update AnnotatorCore.py"}},{"before":"7bff35247aca3bf4a63d640667d553692f12b580","after":"92226c352f9ce51843d540c2731fc2211cc6909c","ref":"refs/heads/rc","pushedAt":"2023-11-14T22:36:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Update tests & Format code","shortMessageHtmlLink":"Update tests & Format code"}},{"before":"d8996c6a923224e11d99dd14622a7670785dc7fa","after":"7bff35247aca3bf4a63d640667d553692f12b580","ref":"refs/heads/rc","pushedAt":"2023-11-02T15:01:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Update README to include info on three additional columns when annotating genomic change","shortMessageHtmlLink":"Update README to include info on three additional columns when annota…"}},{"before":"ea512c7bb9febb7822f7f532b9b01b783060de23","after":"d8996c6a923224e11d99dd14622a7670785dc7fa","ref":"refs/heads/rc","pushedAt":"2023-11-02T14:47:46.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Merge branch 'master' into rc","shortMessageHtmlLink":"Merge branch 'master' into rc"}},{"before":"61c7c7d6cbbe06f2ee80da172d6281d2403fca34","after":"ea512c7bb9febb7822f7f532b9b01b783060de23","ref":"refs/heads/rc","pushedAt":"2023-11-02T14:46:55.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Merge pull request #208 from zhx828/add-oncokb-annotation-columns\n\nAdd additional columns when annotating genomic change","shortMessageHtmlLink":"Merge pull request #208 from zhx828/add-oncokb-annotation-columns"}},{"before":"2bee6c877f54b48462c2a5cd1ecc82ae4fca8b96","after":"e5ef4c2759dad078d108c1b0dc6ab2c6dce33280","ref":"refs/heads/master","pushedAt":"2023-11-01T15:38:37.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Update pytests (#207)\n\n* Update pytests based on latest data\r\n\r\nRemove 2.7 test environment\r\n\r\n2.7 has been removed since June 19","shortMessageHtmlLink":"Update pytests (#207)"}},{"before":"585455313b46dda2412554ff96634c21d42aac77","after":"2bee6c877f54b48462c2a5cd1ecc82ae4fca8b96","ref":"refs/heads/master","pushedAt":"2023-08-24T17:11:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Add R script to generate the actionability figure","shortMessageHtmlLink":"Add R script to generate the actionability figure"}},{"before":"3c9773d9af33c65f411bfa473dbef5b244759ca2","after":"61c7c7d6cbbe06f2ee80da172d6281d2403fca34","ref":"refs/heads/rc","pushedAt":"2023-07-11T19:12:23.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Add descriptions into appended column list (#204)\n\nAdd option to include descriptions\r\n\r\nThe added descriptions include the following\r\n- GENE_SUMMARY\r\n- VARIANT_SUMMARY\r\n- TUMOR_TYPE_SUMMARY\r\n- DIAGNOSTIC_SUMMARY\r\n- PROGNOSTIC_SUMMARY\r\n- MUTATION_EFFECT_DESCRIPTION","shortMessageHtmlLink":"Add descriptions into appended column list (#204)"}},{"before":"585455313b46dda2412554ff96634c21d42aac77","after":"3c9773d9af33c65f411bfa473dbef5b244759ca2","ref":"refs/heads/rc","pushedAt":"2023-06-29T20:50:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Update .version-level","shortMessageHtmlLink":"Update .version-level"}},{"before":null,"after":"585455313b46dda2412554ff96634c21d42aac77","ref":"refs/heads/rc","pushedAt":"2023-06-29T20:49:17.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"zhx828","name":"Hongxin","path":"/zhx828","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/5400599?s=80&v=4"},"commit":{"message":"Updates to annotator by genomic change (#191)\n\n- Make TUMOR_SEQ_ALLELE1 column optional, it is usually the reference allele\r\n- Support chr prefix for chromosome","shortMessageHtmlLink":"Updates to annotator by genomic change (#191)"}},{"before":null,"after":"8ffadff60a86ddf09b82ecaa0b6594e936bd367e","ref":"refs/heads/dependabot/pip/requirements/requests-2.31.0","pushedAt":"2023-05-23T03:25:50.102Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"dependabot[bot]","name":null,"path":"/apps/dependabot","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/29110?s=80&v=4"},"commit":{"message":"Bump requests from 2.27.1 to 2.31.0 in /requirements\n\nBumps [requests](https://github.com/psf/requests) from 2.27.1 to 2.31.0.\n- [Release notes](https://github.com/psf/requests/releases)\n- [Changelog](https://github.com/psf/requests/blob/main/HISTORY.md)\n- [Commits](https://github.com/psf/requests/compare/v2.27.1...v2.31.0)\n\n---\nupdated-dependencies:\n- dependency-name: requests\n dependency-type: direct:production\n...\n\nSigned-off-by: dependabot[bot] ","shortMessageHtmlLink":"Bump requests from 2.27.1 to 2.31.0 in /requirements"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAD-wm8RwA","startCursor":null,"endCursor":null}},"title":"Activity · oncokb/oncokb-annotator"}