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Add Mermaid Graph to Readme for users #180

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apeltzer opened this issue Nov 9, 2022 · 1 comment
Open

Add Mermaid Graph to Readme for users #180

apeltzer opened this issue Nov 9, 2022 · 1 comment
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documentation enhancement New feature or request

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@apeltzer
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apeltzer commented Nov 9, 2022

Description of feature

As per suggestion of @Zethson , it would be great to add a Mermaid graph to the readme to help users out who might want to do analysis of various types with the pipeline, e.g. scATAC + scRNA multi-ome analysis.

I might add one that has the scrnaseq domain covered, e.g. for alevin-fry, cellranger, kallisto+bustools, STARsolo.

We can then extend this in PRs for Universc @TomKellyGenetics and the multi-ome analysis that @heylf brought up if the community deems this useful.

Another discussion we might have to have is a rename of the pipeline, as it can do way more than just scrnaseq in such cases - good naming is however tricky here. Also linking to discussion on Slack https://nfcore.slack.com/archives/CE4K7FEHE/p1667987775811819

@apeltzer apeltzer added the enhancement New feature or request label Nov 9, 2022
@apeltzer apeltzer self-assigned this Nov 9, 2022
@grst
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grst commented Mar 9, 2023

This is not rendered on the website:

image

Probably easiest to produce the graph elsewhere and upload a png.

@grst grst mentioned this issue Mar 13, 2023
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