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FEAT: Pass scientific name as input to download the data #235

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maxulysse opened this issue Nov 2, 2023 — with Slack · 0 comments
Open

FEAT: Pass scientific name as input to download the data #235

maxulysse opened this issue Nov 2, 2023 — with Slack · 0 comments

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maxulysse commented Nov 2, 2023

For Example, I want to get the data with keywords " lung cancer", "WES"

It is same like SRA explorer does, we just feed the keywords and get the ftp urls to download the data. Does fetchngs pipeline has this feature?

cf https://nfcore.slack.com/archives/C024915L4KB/p1698913937015109

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