rethink check_replicates process for DSL2

[bozmik]

Think if there is a better way of including what the pipeline does in the check_replicates process for the DSL2 pipeline

dualrnaseq/main.nf

Lines 756 to 776 in 3e35f47

	process check_replicates {
	tag "check_replicates"
	label 'process_high'
	input:
	val(sample_name) from scatter_plots.collect()
	output:
	stdout repl_scatter_plots_salmon_pathogen
	stdout repl_scatter_plots_salmon_host
	stdout repl_scatter_plots_salmon_alignment_host
	stdout repl_scatter_plots_salmon_alignment_pathogen
	stdout repl_scatter_plots_htseq_pathogen
	stdout repl_scatter_plots_htseq_host
	shell:
	'''
	python !{workflow.projectDir}/bin/check_replicates.py -s !{sample_name} 2>&1
	'''
	}