Getting alignments after running with "-n"

[thekswenson]

Thanks for your nice tool.

Once I've run SibeliaZ once using the -n switch to compute just the blocks, is there a way to then compute the alignments using the blocks that have already been computed?

This feature would save time for me, since I'm using large genomes.

Alternatively, it would provide another use case, where I could specify a new, or modify the existing, blocks_coords.maf file, using the next call to SibeliaZ in an alignment step.