How to map with pre-built indexes ?

[AbhinavDutta]

Is it the same as with minimap? Becuase this leads to segfaults in my case :
./winnowmap -W {repetitive_file} -w 10 -k 15 -t 50 -x map-pb-clr -H -d {index_file} {reference_file} -> for indexing
./winnowmap -W {repetitve_file} -w 10 -k 15 -t 50 -x map-pb-clr -H -a {index_file} {read_file} > align.sam -> for mapping

[cjain7]

See #29

[keocorak]

Can you clarify if this was solved with commit b373a77?

I just got the same segfault as the OP, so if it was fixed some guide on how to run with a prebuilt index would be appreciated.