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converting fasta to fastq #209

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keecarter opened this issue Mar 22, 2024 · 2 comments
Open

converting fasta to fastq #209

keecarter opened this issue Mar 22, 2024 · 2 comments

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@keecarter
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I am attempting to convert my fasta files to fastq using the command:
seq -F contig.2.fasta > contig.2.fq

but I keep getting:
seq: invalid option -- F

@shenwei356
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seq: invalid option -- F

This is the seq command from the system.

The right way is

seqtk seq -F G      contig.2.fasta > contig.2.fq

@keecarter
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So I am getting an fq file, but it is empty.

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