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Lost segment sequences while producing unitigs #9

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snurk opened this issue Nov 22, 2019 · 1 comment
Open

Lost segment sequences while producing unitigs #9

snurk opened this issue Nov 22, 2019 · 1 comment
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enhancement New feature or request

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@snurk
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snurk commented Nov 22, 2019 •
edited

While my original gfa file has sequences in it, but asm -u command results in a gfa having * for all the segments.
Is there an option to produce the unitig graph with sequences?
@lh3 lh3 added the enhancement New feature or request label Nov 23, 2019
@lh3
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lh3 commented Nov 23, 2019

gfatools doesn't have this feature so far, unfortunately.

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@lh3 @snurk