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Classify complex SV calling from fermikit ? #14

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wenbinmei opened this issue Aug 19, 2016 · 0 comments
Open

Classify complex SV calling from fermikit ? #14

wenbinmei opened this issue Aug 19, 2016 · 0 comments

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@wenbinmei
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wenbinmei commented Aug 19, 2016 •
edited

Hi Heng,

Thank you for developing the fermikit. I am trying your fermikit tools on a 30x whole genome sequencing population data. I successfully run the fermikit so far. But I wonder is there a way to classify the complex structure variation besides deletion and insertion called in fermikit? I just start this population level CNV project and very new to this kind of analysis. Thank you for help.

Cheers,
wenbin
@wenbinmei wenbinmei changed the title genotyping calling from fermikit and also interpret complex SV calling ? genotyping SV calling from fermikit ? Aug 30, 2016
@wenbinmei wenbinmei changed the title genotyping SV calling from fermikit ? Classify complex SV calling from fermikit ? Aug 30, 2016
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