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@kiharalab

Kihara Protein Bioinformatics Laboratory

Software developed in the Kihara Lab

Popular repositories

  1. ACC-UNet ACC-UNet Public

    ACC-UNet is A Completely Convolutional UNet model inspired from transformer-based UNets

    Python 90 9

  2. GNN_DOVE GNN_DOVE Public

    Code for "Protein Docking Model Evaluation by Graph Neural Networks"

    Python 56 22

  3. DOVE DOVE Public

    A Deep-learning based dOcking decoy eValuation mEthod

    Python 54 13

  4. CryoREAD CryoREAD Public

    CryoREAD: a computational tool using deep learning to automatically build full DNA/RNA atomic structure from cryo-EM map.

    Python 25 3

  5. Emap2sec Emap2sec Public

    Emap2sec is a computational tool to identify protein secondary structures

    Jupyter Notebook 15 7

  6. Emap2secPlus Emap2secPlus Public

    Emap2sec+: Detecting Protein and DNA/RNA Structures in Cryo-EM Maps of Intermediate Resolution Using Deep Learning

    Jupyter Notebook 15 8

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