HPCC_Hasher.sub

#!/bin/bash -login
#PBS -l walltime=12:00:00,nodes=1:ppn=2
#PBS -j oe
#PBS -N Hasher_Flash

# Memory needed by the job
#PBS -l mem=200gb

### load necessary modules, e.g.
module load Biopython

# change to the working directory where your code is located
cd $PBS_O_WORKDIR
 
# call your executable
/usr/bin/time -v python barcodeHasher.py forward_paired.fq,reverse_paired.fq,forward_unpaired.fq,JasmineR_PB_CTTGTA_L002_R1_001.fastq --pairSeparateFile --useFwdUnpaired --FLASH