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Hello,
I tried running the example but got the following error:
> Error: Shape contains invalid polygons. Please fix it or set tmap_options(check.and.fix = TRUE) and rerun the plot
The code still did not work (was frozen) after setting the tmap_options(check.and.fix = TRUE)
tmap_options(check.and.fix = TRUE)
Can you check what went wrong? Thank you!
library(concaveman) library(dplyr) library(purrr) library(sf) library(tmap) data(points) polygons <- map(unique(points$k), ~ concaveman(points[points$k %in% .,]) ) %>% map2(unique(points$k), ~ mutate(.x, k = .y)) %>% reduce(rbind) tm_shape(points) + tm_dots(col = "k", size = 0.1, legend.show = FALSE) + tm_shape(polygons) + tm_fill(col = "k", alpha = 0.5, legend.show = FALSE) + tm_borders() + tm_layout(frame = FALSE) #> Error: Shape contains invalid polygons. Please fix it or set tmap_options(check.and.fix = TRUE) and rerun the plot
Created on 2021-10-19 by the reprex package (v2.0.1)
sessioninfo::session_info() #> - Session info --------------------------------------------------------------- #> setting value #> version R version 4.1.0 (2021-05-18) #> os Windows 10 x64 #> system x86_64, mingw32 #> ui RTerm #> language (EN) #> collate English_United States.1252 #> ctype English_United States.1252 #> tz America/Los_Angeles #> date 2021-10-19 #> #> - Packages ------------------------------------------------------------------- #> package * version date lib #> abind 1.4-5 2016-07-21 [1] #> assertthat 0.2.1 2019-03-21 [1] #> backports 1.2.1 2020-12-09 [1] #> base64enc 0.1-3 2015-07-28 [1] #> class 7.3-19 2021-05-03 [2] #> classInt 0.4-3 2020-04-07 [1] #> cli 3.0.1 2021-07-17 [1] #> codetools 0.2-18 2020-11-04 [2] #> concaveman * 1.1.0 2020-05-11 [1] #> crayon 1.4.1 2021-02-08 [1] #> crosstalk 1.1.1 2021-01-12 [1] #> curl 4.3.2 2021-06-23 [1] #> DBI 1.1.1 2021-01-15 [1] #> dichromat 2.0-0 2013-01-24 [1] #> digest 0.6.28 2021-09-23 [1] #> dplyr * 1.0.7.9000 2021-10-15 [1] #> e1071 1.7-9 2021-09-16 [1] #> ellipsis 0.3.2 2021-04-29 [1] #> evaluate 0.14 2019-05-28 [1] #> fansi 0.5.0 2021-05-25 [1] #> fastmap 1.1.0 2021-01-25 [1] #> fs 1.5.0 2020-07-31 [1] #> generics 0.1.0 2020-10-31 [1] #> glue 1.4.2 2020-08-27 [1] #> highr 0.9 2021-04-16 [1] #> htmltools 0.5.2.9000 2021-08-26 [1] #> htmlwidgets 1.5.4 2021-09-08 [1] #> httr 1.4.2 2020-07-20 [1] #> jsonlite 1.7.2 2020-12-09 [1] #> KernSmooth 2.23-20 2021-05-03 [2] #> knitr 1.36 2021-09-29 [1] #> lattice 0.20-45 2021-09-22 [1] #> leafem 0.1.6 2021-05-24 [1] #> leaflet 2.0.4.1 2021-01-07 [1] #> leafsync 0.1.0 2019-03-05 [1] #> lifecycle 1.0.1 2021-09-24 [1] #> lwgeom 0.2-8 2021-10-06 [1] #> magrittr 2.0.1 2020-11-17 [1] #> mime 0.12 2021-09-28 [1] #> pillar 1.6.4 2021-10-18 [1] #> pkgconfig 2.0.3 2019-09-22 [1] #> png 0.1-7 2013-12-03 [1] #> proxy 0.4-26 2021-06-07 [1] #> purrr * 0.3.4.9000 2021-05-18 [1] #> R.cache 0.15.0 2021-04-30 [1] #> R.methodsS3 1.8.1 2020-08-26 [1] #> R.oo 1.24.0 2020-08-26 [1] #> R.utils 2.11.0 2021-09-26 [1] #> R6 2.5.1 2021-08-19 [1] #> raster 3.5-2 2021-10-11 [1] #> RColorBrewer 1.1-2 2014-12-07 [1] #> Rcpp 1.0.7 2021-07-07 [1] #> reprex 2.0.1 2021-08-05 [1] #> rlang 0.99.0.9000 2021-10-19 [1] #> rmarkdown 2.11 2021-09-14 [1] #> rstudioapi 0.13 2020-11-12 [1] #> s2 1.0.7 2021-09-28 [1] #> sessioninfo 1.1.1 2018-11-05 [1] #> sf * 1.0-3 2021-10-07 [1] #> sp 1.4-5 2021-01-10 [1] #> stars 0.5-3 2021-06-08 [1] #> stringi 1.7.5 2021-10-04 [1] #> stringr 1.4.0 2019-02-10 [1] #> styler 1.6.2 2021-09-23 [1] #> terra 1.4-14 2021-10-15 [1] #> tibble 3.1.5 2021-09-30 [1] #> tidyselect 1.1.1 2021-04-30 [1] #> tmap * 3.3-2 2021-06-16 [1] #> tmaptools 3.1-1 2021-01-19 [1] #> units 0.7-2 2021-06-08 [1] #> utf8 1.2.2 2021-07-24 [1] #> V8 3.4.2 2021-05-01 [1] #> vctrs 0.3.8 2021-04-29 [1] #> viridisLite 0.4.0 2021-04-13 [1] #> withr 2.4.2 2021-04-18 [1] #> wk 0.5.0 2021-07-13 [1] #> xfun 0.27 2021-10-18 [1] #> XML 3.99-0.8 2021-09-17 [1] #> xml2 1.3.2 2020-04-23 [1] #> yaml 2.2.1 2020-02-01 [1] #> source #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.1) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.1) #> Github (tidyverse/dplyr@74ace27) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> Github (rstudio/htmltools@6a03c3f) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.1) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> Github (tidyverse/purrr@5aca9df) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> Github (r-lib/rlang@eb77d6e) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.1) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.1) #> https://rspatial.r-universe.dev (R 4.1.1) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #> CRAN (R 4.1.1) #> CRAN (R 4.1.0) #> CRAN (R 4.1.0) #>
The text was updated successfully, but these errors were encountered:
I've also experienced this. Increasing the concavity value can make the returned polygon valid, but the shape becomes more of a convex hull.
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Hello,
I tried running the example but got the following error:
> Error: Shape contains invalid polygons. Please fix it or set tmap_options(check.and.fix = TRUE) and rerun the plot
The code still did not work (was frozen) after setting the
tmap_options(check.and.fix = TRUE)
Can you check what went wrong? Thank you!
Created on 2021-10-19 by the reprex package (v2.0.1)
Session info
The text was updated successfully, but these errors were encountered: