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Import GTF in lieu of a UCSC genome #2

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jeffbhasin opened this issue Mar 20, 2017 · 0 comments
Open

Import GTF in lieu of a UCSC genome #2

jeffbhasin opened this issue Mar 20, 2017 · 0 comments
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@jeffbhasin
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UCSC's database does not include any plant genomes. Thus, Goldmine currently does not support annotation of plant genomics data. Could a GTF parser be included that enables using genes from a non-UCSC genome? In particular, plant genomes from http://plants.ensembl.org/?
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