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No output with --connected-components algorithm #31

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laurapspector opened this issue Aug 6, 2019 · 3 comments
Open

No output with --connected-components algorithm #31

laurapspector opened this issue Aug 6, 2019 · 3 comments

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@laurapspector
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I'm running starcode as ./starcode-master/starcode -t 4 -c --print-clusters -i INFILE and I get no output. When I change '-c' to '-r 5.0' or '-s' I get output as expected. Is there some other option required in order to get output when using the connected components cluster algorithm?

@ezorita
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ezorita commented Aug 7, 2019

Hi,

thanks for your note. I am not able to reproduce this behavior in our test files. Would you mind sending an input file which reproduces this error?

Thanks!

Eduard

@laurapspector
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Hi Eduard,
So far it's only happening with my large files ~6GB but not when I try it on small portions of them. I will keep searching for a smaller example that reproduces the error.
Thanks!

@ezorita
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ezorita commented Aug 8, 2019

Retaining the connected components cluster graph for a 6GB file may take a lot of memory.
How much memory does your machine have?
Can you check the exit status of starcode after running on such file?

Eduard

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