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@EmbryoPhenomics

EmbryoPhenomics

Software and tools associated with the EmbryoPhenomics platform.

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  1. vuba vuba Public

    An easy to use library for constructing OpenCV HighGUI interfaces.

    Python 3

  2. embryo_segmentation embryo_segmentation Public

    Models, weights and scripts for semantic segmentation of embryos in microscopy images. Including popular CNNs such as UNet, PSPnet and DeepLabV3.

    Python 3

  3. embryocv_ept_examples embryocv_ept_examples Public

    Jupyter Notebook 2

  4. embryocv_data_view embryocv_data_view Public

    A little interactive app for visualising individual level phenome data from EmbryoCV.

    Python 2

  5. LabEmbryoCam LabEmbryoCam Public

    Hardware and software for building and running a LabEmbryoCam system for phenotyping aquatic embryos

    Python 2

  6. heartcv heartcv Public

    Software for automated quantification of cardiac traits from video of transparent animals.

    Python 1

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