Predicted values tab error #280

ybrandvain · 2022-08-31T03:46:25Z

loving easy stats! but there im running into an issue with the predicted values tab on the easydashboard. [see reprex below and attached html or screengrab]

easydashboard.html.zip

library(easystats)
#> # Attaching packages: easystats 0.5.2
#> ✔ insight     0.18.2    ✔ datawizard  0.5.1  
#> ✔ bayestestR  0.12.1    ✔ performance 0.9.2  
#> ✔ parameters  0.18.2    ✔ effectsize  0.7.0.5
#> ✔ modelbased  0.8.5     ✔ correlation 0.8.2  
#> ✔ see         0.7.2     ✔ report      0.5.5
mod <- lm(formula = Sepal.Width ~ Sepal.Length * Species, data = iris)
model_dashboard(mod)
#> processing file: easydashboard.Rmd
#> Error in parse_block(g[-1], g[1], params.src, markdown_mode): Duplicate chunk label 'unnamed-chunk-1', which has been used for the chunk:
#> cat(sprintf("*Local `.Rprofile` detected at `%s`*", normalizePath(".Rprofile")))

^{Created on 2022-08-30 with reprex v2.0.2}

Session info

sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#>  setting  value
#>  version  R version 4.2.1 (2022-06-23)
#>  os       macOS Big Sur ... 10.16
#>  system   x86_64, darwin17.0
#>  ui       X11
#>  language (EN)
#>  collate  en_US.UTF-8
#>  ctype    en_US.UTF-8
#>  tz       America/Chicago
#>  date     2022-08-30
#>  pandoc   2.18 @ /Applications/RStudio.app/Contents/MacOS/quarto/bin/tools/ (via rmarkdown)
#> 
#> ─ Packages ───────────────────────────────────────────────────────────────────
#>  package       * version date (UTC) lib source
#>  assertthat      0.2.1   2019-03-21 [2] CRAN (R 4.2.0)
#>  bayestestR    * 0.12.1  2022-05-02 [1] CRAN (R 4.2.0)
#>  bslib           0.4.0   2022-07-16 [1] CRAN (R 4.2.0)
#>  cachem          1.0.6   2021-08-19 [2] CRAN (R 4.2.0)
#>  cli             3.3.0   2022-04-25 [2] CRAN (R 4.2.0)
#>  colorspace      2.0-3   2022-02-21 [2] CRAN (R 4.2.0)
#>  correlation   * 0.8.2   2022-08-09 [1] CRAN (R 4.2.0)


#>  crayon          1.5.1   2022-03-26 [2] CRAN (R 4.2.0)
#>  datawizard    * 0.5.1   2022-08-17 [1] CRAN (R 4.2.0)
#>  DBI             1.1.2   2021-12-20 [2] CRAN (R 4.2.0)
#>  digest          0.6.29  2021-12-01 [2] CRAN (R 4.2.0)
#>  dplyr           1.0.9   2022-04-28 [1] CRAN (R 4.2.0)
#>  DT              0.23    2022-05-10 [1] CRAN (R 4.2.0)
#>  easystats     * 0.5.2   2022-08-30 [1] CRAN (R 4.2.1)
#>  effectsize    * 0.7.0.5 2022-08-10 [1] CRAN (R 4.2.0)
#>  ellipsis        0.3.2   2021-04-29 [2] CRAN (R 4.2.0)
#>  evaluate        0.16    2022-08-09 [1] CRAN (R 4.2.0)
#>  fansi           1.0.3   2022-03-24 [2] CRAN (R 4.2.0)
#>  fastmap         1.1.0   2021-01-25 [2] CRAN (R 4.2.0)
#>  flexdashboard   0.6.0   2022-08-05 [1] CRAN (R 4.2.0)
#>  fs              1.5.2   2021-12-08 [2] CRAN (R 4.2.0)
#>  generics        0.1.3   2022-07-05 [1] CRAN (R 4.2.0)
#>  ggplot2         3.3.6   2022-05-03 [1] CRAN (R 4.2.0)
#>  glue            1.6.2   2022-02-24 [2] CRAN (R 4.2.0)
#>  gtable          0.3.0   2019-03-25 [2] CRAN (R 4.2.0)
#>  highr           0.9     2021-04-16 [2] CRAN (R 4.2.0)
#>  htmltools       0.5.3   2022-07-18 [1] CRAN (R 4.2.0)
#>  htmlwidgets     1.5.4   2021-09-08 [2] CRAN (R 4.2.0)
#>  insight       * 0.18.2  2022-08-10 [1] CRAN (R 4.2.0)
#>  jquerylib       0.1.4   2021-04-26 [2] CRAN (R 4.2.0)
#>  jsonlite        1.8.0   2022-02-22 [2] CRAN (R 4.2.0)
#>  knitr           1.40    2022-08-24 [1] CRAN (R 4.2.0)
#>  lifecycle       1.0.1   2021-09-24 [2] CRAN (R 4.2.0)
#>  magrittr        2.0.3   2022-03-30 [2] CRAN (R 4.2.0)
#>  memoise         2.0.1   2021-11-26 [2] CRAN (R 4.2.0)
#>  modelbased    * 0.8.5   2022-08-18 [1] CRAN (R 4.2.0)
#>  munsell         0.5.0   2018-06-12 [2] CRAN (R 4.2.0)
#>  parameters    * 0.18.2  2022-08-10 [1] CRAN (R 4.2.0)
#>  performance   * 0.9.2   2022-08-10 [1] CRAN (R 4.2.0)
#>  pillar          1.7.0   2022-02-01 [2] CRAN (R 4.2.0)
#>  pkgconfig       2.0.3   2019-09-22 [2] CRAN (R 4.2.0)
#>  purrr           0.3.4   2020-04-17 [2] CRAN (R 4.2.0)
#>  R6              2.5.1   2021-08-19 [2] CRAN (R 4.2.0)
#>  report        * 0.5.5   2022-08-22 [1] CRAN (R 4.2.0)
#>  reprex          2.0.2   2022-08-17 [1] CRAN (R 4.2.0)
#>  rlang           1.0.4   2022-07-12 [1] CRAN (R 4.2.0)
#>  rmarkdown       2.16    2022-08-24 [1] CRAN (R 4.2.0)
#>  rstudioapi      0.13    2020-11-12 [2] CRAN (R 4.2.0)
#>  sass            0.4.2   2022-07-16 [1] CRAN (R 4.2.0)
#>  scales          1.2.0   2022-04-13 [2] CRAN (R 4.2.0)
#>  see           * 0.7.2   2022-08-10 [1] CRAN (R 4.2.0)
#>  sessioninfo     1.2.2   2021-12-06 [1] CRAN (R 4.2.0)
#>  stringi         1.7.8   2022-07-11 [1] CRAN (R 4.2.0)
#>  stringr         1.4.1   2022-08-20 [1] CRAN (R 4.2.0)
#>  tibble          3.1.7   2022-05-03 [2] CRAN (R 4.2.0)
#>  tidyselect      1.1.2   2022-02-21 [2] CRAN (R 4.2.0)
#>  utf8            1.2.2   2021-07-24 [2] CRAN (R 4.2.0)
#>  vctrs           0.4.1   2022-04-13 [2] CRAN (R 4.2.0)
#>  withr           2.5.0   2022-03-03 [2] CRAN (R 4.2.0)
#>  xfun            0.32    2022-08-10 [1] CRAN (R 4.2.0)
#>  yaml            2.3.5   2022-02-21 [2] CRAN (R 4.2.0)
#> 
#>  [1] /Users/ybrandva/Library/R/x86_64/4.2/library
#>  [2] /Library/Frameworks/R.framework/Versions/4.2/Resources/library
#> 
#> ──────────────────────────────────────────────────────────────────────────────

strengejacke · 2022-08-31T05:52:30Z

Ok, this is probably a bit more difficult to debug, because the same model worked for me w/o any problems. Can you first try following:

Update the easystats package: install.packages("easystats", repos = "https://easystats.r-universe.dev") (note the r-universe repo!)
After installation, update the core-packages: easystats::install_latest() (note: don't load the library(easystats) after installation, directly call the function as shown in the code here)

After that, load library(easystats), and you should see that you have package version 0.5.2.1 and also the other packages have higher version numbers. Then try your example again please.

strengejacke · 2022-08-31T05:55:14Z

This is roughly what you should see when loading easystats after updating:

strengejacke · 2022-08-31T05:56:07Z

@IndrajeetPatil do you have any ideas? The error message referring to the rprofile-file looks strange to me.

ybrandvain · 2022-08-31T06:21:00Z

not ?fully? fixed .. but different error

library(easystats)
#> # Attaching packages: easystats 0.5.2.1
#> ✔ insight     0.18.2.7     ✔ datawizard  0.5.1.4   
#> ✔ bayestestR  0.12.1.2     ✔ performance 0.9.2.2   
#> ✔ parameters  0.18.2.5     ✔ effectsize  0.7.0.9999
#> ✔ modelbased  0.8.5        ✔ correlation 0.8.2.2   
#> ✔ see         0.7.2.1      ✔ report      0.5.5.1
mod <- lm(formula = Sepal.Width ~ Sepal.Length * Species, data = iris)
model_dashboard(mod)
#> processing file: easydashboard.Rmd
#> Error in parse_block(g[-1], g[1], params.src, markdown_mode): Duplicate chunk label 'unnamed-chunk-1', which has been used for the chunk:
#> cat(sprintf("*Local `.Rprofile` detected at `%s`*", normalizePath(".Rprofile")))

^{Created on 2022-08-31 with reprex v2.0.2}

Session info

sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#>  setting  value
#>  version  R version 4.2.1 (2022-06-23)
#>  os       macOS Big Sur ... 10.16
#>  system   x86_64, darwin17.0
#>  ui       X11
#>  language (EN)
#>  collate  en_US.UTF-8
#>  ctype    en_US.UTF-8
#>  tz       America/Chicago
#>  date     2022-08-31
#>  pandoc   2.18 @ /Applications/RStudio.app/Contents/MacOS/quarto/bin/tools/ (via rmarkdown)
#> 
#> ─ Packages ───────────────────────────────────────────────────────────────────
#>  package       * version    date (UTC) lib source
#>  assertthat      0.2.1      2019-03-21 [2] CRAN (R 4.2.0)
#>  bayestestR    * 0.12.1.2   2022-08-29 [1] https://easystats.r-universe.dev (R 4.2.1)
#>  bslib           0.4.0      2022-07-16 [1] CRAN (R 4.2.0)
#>  cachem          1.0.6      2021-08-19 [2] CRAN (R 4.2.0)
#>  cli             3.3.0      2022-04-25 [2] CRAN (R 4.2.0)
#>  colorspace      2.0-3      2022-02-21 [2] CRAN (R 4.2.0)
#>  correlation   * 0.8.2.2    2022-08-29 [1] https://easystats.r-universe.dev (R 4.2.1)
#>  crayon          1.5.1      2022-03-26 [2] CRAN (R 4.2.0)
#>  datawizard    * 0.5.1.4    2022-08-30 [1] https://easystats.r-universe.dev (R 4.2.1)
#>  DBI             1.1.2      2021-12-20 [2] CRAN (R 4.2.0)
#>  digest          0.6.29     2021-12-01 [2] CRAN (R 4.2.0)
#>  dplyr           1.0.9      2022-04-28 [1] CRAN (R 4.2.0)
#>  DT              0.23       2022-05-10 [1] CRAN (R 4.2.0)
#>  easystats     * 0.5.2.1    2022-08-30 [1] https://easystats.r-universe.dev (R 4.2.1)
#>  effectsize    * 0.7.0.9999 2022-08-26 [1] https://easystats.r-universe.dev (R 4.2.1)
#>  ellipsis        0.3.2      2021-04-29 [2] CRAN (R 4.2.0)
#>  evaluate        0.16       2022-08-09 [1] CRAN (R 4.2.0)
#>  fansi           1.0.3      2022-03-24 [2] CRAN (R 4.2.0)
#>  fastmap         1.1.0      2021-01-25 [2] CRAN (R 4.2.0)
#>  flexdashboard   0.6.0      2022-08-05 [1] CRAN (R 4.2.0)
#>  fs              1.5.2      2021-12-08 [2] CRAN (R 4.2.0)
#>  generics        0.1.3      2022-07-05 [1] CRAN (R 4.2.0)
#>  ggplot2         3.3.6      2022-05-03 [1] CRAN (R 4.2.0)
#>  glue            1.6.2      2022-02-24 [2] CRAN (R 4.2.0)
#>  gtable          0.3.0      2019-03-25 [2] CRAN (R 4.2.0)
#>  highr           0.9        2021-04-16 [2] CRAN (R 4.2.0)
#>  htmltools       0.5.3      2022-07-18 [1] CRAN (R 4.2.0)
#>  htmlwidgets     1.5.4      2021-09-08 [2] CRAN (R 4.2.0)
#>  insight       * 0.18.2.7   2022-08-30 [1] https://easystats.r-universe.dev (R 4.2.1)
#>  jquerylib       0.1.4      2021-04-26 [2] CRAN (R 4.2.0)
#>  jsonlite        1.8.0      2022-02-22 [2] CRAN (R 4.2.0)
#>  knitr           1.40       2022-08-24 [1] CRAN (R 4.2.0)
#>  lifecycle       1.0.1      2021-09-24 [2] CRAN (R 4.2.0)
#>  magrittr        2.0.3      2022-03-30 [2] CRAN (R 4.2.0)
#>  memoise         2.0.1      2021-11-26 [2] CRAN (R 4.2.0)
#>  modelbased    * 0.8.5      2022-08-18 [1] CRAN (R 4.2.0)
#>  munsell         0.5.0      2018-06-12 [2] CRAN (R 4.2.0)
#>  parameters    * 0.18.2.5   2022-08-28 [1] https://easystats.r-universe.dev (R 4.2.1)
#>  performance   * 0.9.2.2    2022-08-25 [1] https://easystats.r-universe.dev (R 4.2.1)
#>  pillar          1.7.0      2022-02-01 [2] CRAN (R 4.2.0)
#>  pkgconfig       2.0.3      2019-09-22 [2] CRAN (R 4.2.0)
#>  purrr           0.3.4      2020-04-17 [2] CRAN (R 4.2.0)
#>  R6              2.5.1      2021-08-19 [2] CRAN (R 4.2.0)
#>  report        * 0.5.5.1    2022-08-29 [1] https://easystats.r-universe.dev (R 4.2.1)
#>  reprex          2.0.2      2022-08-17 [1] CRAN (R 4.2.0)
#>  rlang           1.0.4      2022-07-12 [1] CRAN (R 4.2.0)
#>  rmarkdown       2.16       2022-08-24 [1] CRAN (R 4.2.0)
#>  rstudioapi      0.13       2020-11-12 [2] CRAN (R 4.2.0)
#>  sass            0.4.2      2022-07-16 [1] CRAN (R 4.2.0)
#>  scales          1.2.0      2022-04-13 [2] CRAN (R 4.2.0)
#>  see           * 0.7.2.1    2022-08-25 [1] https://easystats.r-universe.dev (R 4.2.1)
#>  sessioninfo     1.2.2      2021-12-06 [1] CRAN (R 4.2.0)
#>  stringi         1.7.8      2022-07-11 [1] CRAN (R 4.2.0)
#>  stringr         1.4.1      2022-08-20 [1] CRAN (R 4.2.0)
#>  tibble          3.1.7      2022-05-03 [2] CRAN (R 4.2.0)
#>  tidyselect      1.1.2      2022-02-21 [2] CRAN (R 4.2.0)
#>  utf8            1.2.2      2021-07-24 [2] CRAN (R 4.2.0)
#>  vctrs           0.4.1      2022-04-13 [2] CRAN (R 4.2.0)
#>  withr           2.5.0      2022-03-03 [2] CRAN (R 4.2.0)
#>  xfun            0.32       2022-08-10 [1] CRAN (R 4.2.0)
#>  yaml            2.3.5      2022-02-21 [2] CRAN (R 4.2.0)
#> 
#>  [1] /Users/ybrandva/Library/R/x86_64/4.2/library
#>  [2] /Library/Frameworks/R.framework/Versions/4.2/Resources/library
#> 
#> ──────────────────────────────────────────────────────────────────────────────

Uploading easydashboard.html.zip…

IndrajeetPatil · 2022-08-31T06:22:14Z

Yeah, this should definitely not be the case; there is something in .Rprofile file that seems to be messing with the rendering.

Error in parse_block(g[-1], g[1], params.src, markdown_mode): Duplicate chunk label 'unnamed-chunk-1', which has been used for the chunk:

strengejacke · 2022-08-31T06:34:58Z

Is your .Rprofile file top secret or can you post its content here? Maybe we find out more.

tegedik mentioned this issue Aug 31, 2022

Predicted Values for glm #282

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Predicted values tab error #280

Predicted values tab error #280

ybrandvain commented Aug 31, 2022

strengejacke commented Aug 31, 2022

strengejacke commented Aug 31, 2022

strengejacke commented Aug 31, 2022

ybrandvain commented Aug 31, 2022

IndrajeetPatil commented Aug 31, 2022

strengejacke commented Aug 31, 2022

Predicted values tab error #280

Predicted values tab error #280

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ybrandvain commented Aug 31, 2022

strengejacke commented Aug 31, 2022

strengejacke commented Aug 31, 2022

strengejacke commented Aug 31, 2022

ybrandvain commented Aug 31, 2022

IndrajeetPatil commented Aug 31, 2022

strengejacke commented Aug 31, 2022