AMOS-3.1.0_link_correctly_to_DELTAFILER_SHOWCOORDS.patch

minimus2 needs delta-filter and show-coords but these were not set correctly like NUCMER
author: Lara Peeters (HPC-UGent)
diff -ru amos-3.1.0.orig/src/Pipeline/Makefile.in amos-3.1.0/src/Pipeline/Makefile.in
--- amos-3.1.0.orig/src/Pipeline/Makefile.in	2011-08-05 05:08:07.000000000 +0200
+++ amos-3.1.0/src/Pipeline/Makefile.in	2024-03-14 12:31:16.218067000 +0100
@@ -477,7 +477,8 @@
                 echo '#!$(bindir)/runAmos -C' > "$(DESTDIR)$(bindir)/$$b"; \
                 sed -e 's|^BINDIR[ 	]*=.*$$|BINDIR=$(bindir)|' \
                     -e 's|^NUCMER[ 	]*=.*$$|NUCMER=$(NUCMER)|' \
-                    -e 's|^DELTAFILTER[        ]*=.*$$|DELTAFILTER=$(DELTAFILTER)|' \
+                    -e 's|^DELTAFILTER[ 	]*=.*$$|DELTAFILTER=$(DELTAFILTER)|' \
+                    -e 's|^SHOWCOORDS[ 	]*=.*$$|SHOWCOORDS=$(SHOWCOORDS)|' \
                     "$(DESTDIR)$(bindir)/$$f" >> "$(DESTDIR)$(bindir)/$$b" \
                 || exit 1; \
                 ;; \