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A modular, containerized pipeline for ATAC-seq data processing
R 52 13
Annotating epigenetic variation among samples with region sets in R
R 10
An interactive Shiny web application for genomic interval enrichment analysis using LOLA.
R 16 2
Links to ATAC-seq analysis tools
44 6
R package for Methylation-based Inference of Regulatory Activity
R 11 1
Python toolkit for building restartable pipelines
Python 45 9
Aggregate, analyze, and serve genomic regions.
Python pipeline for processing BED files for BEDbase
Author academic documents in markdown
Configuration package for bedbase project
Genomic interval machine learning
Small logging setup package
YAML configuration manager