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Update watershed algorithm getting used ? #1503

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HaleySchuhl opened this issue Apr 24, 2024 · 0 comments
Open

Update watershed algorithm getting used ? #1503

HaleySchuhl opened this issue Apr 24, 2024 · 0 comments
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new feature New feature ideas and solutions

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@HaleySchuhl
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HaleySchuhl commented Apr 24, 2024

Is your feature request related to a problem? Please describe.
something I think Mao mentioned before, which is that other watershed algorithms that use the rgb/grayscale image to inform marker boundaries. OpenCV's method seems to use the RGB image, and maybe would therefore give improved results? Would need to test on use cases common for our group, e.g. leaf and pollen segmentation.

Use annotation coordinates as "seeds" for watershed?

Describe the solution you'd like
Test and implement OpenCV's watershed algorithm into pcv.watershed_segmentation if the outcomes are improved.

Describe alternatives you've considered
Leave it the way it is.

@HaleySchuhl HaleySchuhl added the new feature New feature ideas and solutions label Apr 24, 2024
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