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Polygon gates using density plots #319

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protist opened this issue Sep 21, 2021 · 2 comments
Open

Polygon gates using density plots #319

protist opened this issue Sep 21, 2021 · 2 comments

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@protist
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protist commented Sep 21, 2021

PLATFORM (Mac, PC, Linux, other):

Linux

OPERATING SYSTEM (eg OSX 10.7, Windows 8.1):

Up-to-date Arch Linux

SEVERITY (Critical? Major? Minor? Enhancement?):

Enhancement

DESCRIPTION:

  • What were you trying to do? Create a polygon gate using a density plot
  • What happened? I could not find an option to do this.
  • What did you expect to happen? Have an option to create a polygon gate using a density plot.

Further information

I know how to create a polygon gate, which uses a dot plot.

poly_gate

However, I'd like to create the polygon gate using a density plot instead. I tried using the 2D Mixture Model (density gate), but while this looked useful, it didn't allow creating a manual polygon gate. When looking at the plot, I can see (at least) two distinct populations, which are less evident from the dot plot above.

density_gate

Is it possible to create polygon gates from density plots?

@kristjaneerik
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I was working on this here #269

@protist
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protist commented Sep 22, 2021

Thanks @kristjaneerik ! I look forward to the merge.

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