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LFQ fail #63

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Mohee66 opened this issue Feb 12, 2024 · 0 comments
Open

LFQ fail #63

Mohee66 opened this issue Feb 12, 2024 · 0 comments

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@Mohee66
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Mohee66 commented Feb 12, 2024

Hi
I am running LFQ test on two samples that I already tested with Maxquant separately. But now when I use the LFQ it closes the program and this is the error, this error happens for all raw files. I have tried different version but still not working

id 0
start 13-02-2024 09:04:19
title Assemble_run_info (80/96)
description F:Bgel & Bpep LFQ\230217_MM_QE1_BK2-16.raw
error F:Bgel & Bpep LFQ\230217_MM_QE1_BK2-16.raw_An error occurred while parsing EntityName. Line 133, position 34._ at System.Xml.XmlTextReaderImpl.Throw(Exception e)__ at System.Xml.XmlTextReaderImpl.ParseEntityName()__ at System.Xml.XmlTextReaderImpl.ParseEntityReference()__ at System.Xml.XmlTextReaderImpl.Read()__ at MaxQuantLibS.Domains.Peptides.Basic.MaxQuantParamsReaderV000.Read(String filePath)__ at MaxQuantLibS.Domains.Peptides.Basic.MaxQuantParams..ctor(String filePath)__ at MaxQuantLibS.Domains.Peptides.Basic.MaxQuantParams.Read(String filename)__ at MaxQuantLibS.Domains.Peptides.Features.FeatureDetectionUtil.AssembleRunInfo(String mqparFile, Int32 fileIndex)__ at MaxQuantLibS.Domains.Peptides.Work.AssembleRunInfo.Calculation(String[] args, Responder responder)__ at MaxQuantLibS.Domains.Peptides.Work.MaxQuantWorkDispatcherUtil.PerformTask(Int32 taskType, String[] args, Responder responder)__ at MaxQuantLibS.Base.MaxQuantUtils.Run(Int32 softwareId, Int32 taskType, String[] args, Responder responder)__ at MaxQuantTask.Program.Function(String[] args, Responder responder)__ at Utils.Util.ExternalProcess.Run(String[] args, Boolean debug)
end 13-02-2024 09:04:19

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