Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

JN.1+S:F456L on C4795T branch (114 seqs, 14 countries) #2581

Closed
aviczhl2 opened this issue May 6, 2024 · 5 comments
Closed

JN.1+S:F456L on C4795T branch (114 seqs, 14 countries) #2581

aviczhl2 opened this issue May 6, 2024 · 5 comments

Comments

@aviczhl2
Copy link
Contributor

aviczhl2 commented May 6, 2024

From branch 32 of sars-cov-2-variants/lineage-proposals#1253
JN.1+C4795T+T22928C(S:F456L)

GISAID query: C4795T, T22928C, T3565C,-C1762A,-17334
No. of seqs:98(Australia 20 Canada 16 UK 1 Finland 7 France 1 China 4 Japan 8 New Zealand 1 South Korea 30 Vietnam 1 USA 9(2 from Japan, 2 from Thailand, 1 from Qatar, 1 from Taiwan))

First: EPI_ISL_18949364, Vietnam, 2024-1-19
Latest: EPI_ISL_19093705, USA from Thailand, 2024-4-23

usher

image

@aviczhl2
Copy link
Contributor Author

114, Singapore

@aviczhl2 aviczhl2 changed the title JN.1+S:F456L on C4795T branch (98 seqs, 13 countries) JN.1+S:F456L on C4795T branch (114 seqs, 14 countries) May 11, 2024
@aviczhl2
Copy link
Contributor Author

Designated JN.1.51.1

@FedeGueli
Copy link
Contributor

Hi @aviczhl2 i had a query for the S:22N branch linked to this issue , C21627A,C4795T, T22928C, T3565C,-C1762A,-17334 , it is the same query of this and all of them has S:T22N too so i think this is also LJ.1

@aviczhl2
Copy link
Contributor Author

Hi @aviczhl2 i had a query for the S:22N branch linked to this issue , C21627A,C4795T, T22928C, T3565C,-C1762A,-17334 , it is the same query of this and all of them has S:T22N too so i think this is also LJ,1

Do you mean all JN.1.51.1 seqs are LJ.1?

@FedeGueli
Copy link
Contributor

FedeGueli commented May 31, 2024

C21627A

Sorry i saw your comment now, my mistake i have added C21627A to the query so i would let this open to seek designation of the 44seqs S:T22N sublineage of JN.1.51.1. scratch already LJ.1 , my mistakes.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants