JN.1.39 + S:R346T (29 sequences) with a FLiRT branch (2)

[FedeGueli]

Former Branch 51 of sars-cov-2-variants/lineage-proposals#1089

Defining mutations:
JN.1.39 (G2782T )> T111C > S:R346T (G22599C)
Query: G2782T , T111C ,G22599C
Samples: 23
Countries: US, Scotland, NZL, Nigeria, Sweden, France, Russia

FLiRT Branch:
Br.51 > C5986T, ORF1a:F3677L (T11296G), C14220T, Orf1b:T760I (C15746T), S:F456L (T22928C),C24616T , S:V1104L (G24872T), C27389T
Query: G2782T , T111C ,G22599C,T22928C
Samples: 2 US , Malaysia

IDs:
EPI_ISL_18902186, EPI_ISL_18913545, EPI_ISL_18916667,
EPI_ISL_18923350, EPI_ISL_18927559, EPI_ISL_18935614,
EPI_ISL_18937006, EPI_ISL_18956489, EPI_ISL_18973651,
EPI_ISL_18983555, EPI_ISL_18988433, EPI_ISL_19006721,
EPI_ISL_19019132, EPI_ISL_19022508, EPI_ISL_19022873,
EPI_ISL_19038719, EPI_ISL_19041333, EPI_ISL_19055696, EPI_ISL_19060075,
EPI_ISL_19060082, EPI_ISL_19060839

Tree:

https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice27_genome_test_4ea4c_3683b0.json?label=id:node_7086977

[FedeGueli]

Designated JN.1.39.2 via dbfae34