| layout | lineage | version | v | pv | timestamp | today | description | snps | min_snps | max_snps | threshold | import_data | detected | source |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
global_report_page |
BA.1 |
2.0 |
3.1.16 |
2021-11-18 |
2021-12-09, 14:37 GMT |
2021-12-09 |
A lineage detected in a number of countries with a high number of spike protein mutations, since named the Omicron Variant of Concern by the WHO. Designated through GitHub issues cov-lineages/pango-designation#343 and cov-lineages/pango-designation#361 |
del:6513:3<br> del:11283:9<br> nuc:C241T<br> ORF1A:K856R<br> nuc:C3037T<br> nuc:T5386G<br> ORF1A:A2710T<br> ORF1A:T3255I<br> ORF1A:P3395H<br> ORF1A:I3758V<br> nuc:T13195C<br> ORF1B:P314L<br> nuc:C15240T<br> ORF1B:I1566V<br> S:A67V<br> S:T95I<br> S:G339D<br> S:S371L<br> S:S373P<br> S:K417N<br> S:N440K<br> S:G446S<br> S:S477N<br> S:T478K<br> S:E484A<br> S:Q493R<br> S:G496S<br> S:Q498R<br> S:N501Y<br> S:T547K<br> S:D614G<br> S:H655Y<br> S:N679K<br> S:P681H<br> S:N764K<br> S:D796Y<br> S:N856K<br> S:Q954H<br> S:N969K<br> nuc:C25000T<br> E:T9I<br> M:D3G<br> M:Q19E<br> M:A63T<br> nuc:A27259C<br> nuc:C27807T<br> N:RG203KR |
32 |
47 |
NA |
N |
South Africa and Botswana |