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Transposing F matrix in spike deconvolution #187

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XuanweiLi opened this issue Nov 10, 2022 · 0 comments
Open

Transposing F matrix in spike deconvolution #187

XuanweiLi opened this issue Nov 10, 2022 · 0 comments

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@XuanweiLi
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XuanweiLi commented Nov 10, 2022 •
edited

Hi developers, I noticed that in the spike deconvolution stage, specifically in GUI, the deconvolution seems to be weird, having multiple spikes even in the relaxing phase. If I do it manually, one should look like this down below.

original
Screenshot 2022-11-11 at 00 16 08

manual
Screenshot 2022-11-11 at 00 19 01

Screenshot 2022-11-11 at 00 20 16

I guess there is possibly a wrong transpose somewhere before the deconvolution. It seems like it is done across the ROI instead of across time points.

Please correct me if I am wrong.
@XuanweiLi XuanweiLi reopened this Nov 11, 2022
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@XuanweiLi