Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Installation Failure of monocle3 on Windows #703

Open
Cloudien opened this issue Feb 29, 2024 · 0 comments
Open

Installation Failure of monocle3 on Windows #703

Cloudien opened this issue Feb 29, 2024 · 0 comments
Labels
bug Something isn't working

Comments

@Cloudien
Copy link

Dear Monocle3 Developers,

I am encountering an issue while trying to install the monocle3 package from GitHub using the remotes::install_github('cole-trapnell-lab/monocle3') command. Please help me solve the problem.
Below are the details:

Command:
remotes::install_github('cole-trapnell-lab/monocle3')

Error message:
── R CMD build ───────────────────────────────────────────────────────────────────────────────────────────────────────────
✔ checking for file 'C:\Users\Cloud\AppData\Local\Temp\RtmpOOzK4X\remotes463c4e3a6721\cole-trapnell-lab-monocle3-e658515/DESCRIPTION' ...
─ preparing 'monocle3': (664ms)
✔ checking DESCRIPTION meta-information ...
─ cleaning src
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
Omitted 'LazyData' from DESCRIPTION
─ building 'monocle3_1.3.5.tar.gz'

  • installing source package 'monocle3' ...
    ** using staged installation
    ** libs
    0 [main] make 1781 dofork: child -1 - forked process 28516 died unexpectedly, retry 0, exit code 0xC0000142, errno 11
    make: *** [D:/R-4.3.2/share/make/winshlib.mk:39: compilers] Error 127
    Warning in system(paste(MAKE, p1(paste("-f", shQuote(makefiles))), "compilers"), :
    running command 'make -f "Makevars" -f "D:/R-4.3.2/etc/x64/Makeconf" -f "D:/R-4.3.2/share/make/winshlib.mk" compilers' had status 2
    Error in if (nzchar(cxx)) { : argument is of length zero
  • removing 'D:/R-4.3.2/library/monocle3'

R version: 4.3.2
Rtools version: rtools43
Operating System: Windows 10

@Cloudien Cloudien added the bug Something isn't working label Feb 29, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
bug Something isn't working
Projects
None yet
Development

No branches or pull requests

1 participant