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CDS_Extractor
CDS_Extractor PublicScript for extracting Coding DNA Sequence (CDS) values from a GB file.
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mlstar
mlstar PublicA script that matches and returns an ST type number for a given base reference sequence, MLST fragment files (all fasta formatted), and ST type table file.
Perl
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snp_swapper
snp_swapper PublicThis script reconstructs the base sequence using a base reference sequence in FASTA format, and a SNP loci file and indel file produced by prephix. It then does substituting, inserting, or deleting…
Perl
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