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overlap parameter #624

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tianjio opened this issue Mar 10, 2024 · 2 comments
Open

overlap parameter #624

tianjio opened this issue Mar 10, 2024 · 2 comments

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@tianjio
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tianjio commented Mar 10, 2024

I am trying to assemble the haplotype genome. We have high depth HiFi data of about 150×, which we want to assemble through Hifiasm software and improve the accuracy by increasing the length of overlap. But I can't find any parameter item in your software that can be used to change the overlap length. Would you like to know if there is any recommended parameter? Or is it possible to add a parameter module?

@chhylp123
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Sorry for the late reply. Let me add a new parameter for that. I will let you know once it works.

@tianjio
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tianjio commented Mar 30, 2024

Thanks

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