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Input Issue #32

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PadarthiNitheesh opened this issue Sep 30, 2023 · 1 comment
Open

Input Issue #32

PadarthiNitheesh opened this issue Sep 30, 2023 · 1 comment
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@PadarthiNitheesh
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PadarthiNitheesh commented Sep 30, 2023

MRQy is not accepting the dicom images it is showing no of patients 0

This is the thing i am getting
MRQy is starting....
The number of patients is 0
The input folder is empty or includes unsupported files format!
Skipped the t-SNE and UMAP computation because of insufficient data. The UMAP and t-SNE process need at least 6 input data.
Traceback (most recent call last):
File "C:\Users\raman\MRQy-master\src\mrqy\QC.py", line 377, in
df = tsv_to_dataframe(address)
File "C:\Users\raman\MRQy-master\src\mrqy\QC.py", line 206, in tsv_to_dataframe
return pd.read_csv(tsvfileaddress, sep='\t', skiprows=2, header=0)
File "C:\Anaconda\lib\site-packages\pandas\util_decorators.py", line 311, in wrapper
return func(*args, **kwargs)
File "C:\Anaconda\lib\site-packages\pandas\io\parsers\readers.py", line 586, in read_csv
return _read(filepath_or_buffer, kwds)
File "C:\Anaconda\lib\site-packages\pandas\io\parsers\readers.py", line 482, in _read
parser = TextFileReader(filepath_or_buffer, **kwds)
File "C:\Anaconda\lib\site-packages\pandas\io\parsers\readers.py", line 811, in init
self._engine = self._make_engine(self.engine)
File "C:\Anaconda\lib\site-packages\pandas\io\parsers\readers.py", line 1040, in _make_engine
return mapping[engine](self.f, **self.options) # type: ignore[call-arg]
File "C:\Anaconda\lib\site-packages\pandas\io\parsers\c_parser_wrapper.py", line 51, in init
self._open_handles(src, kwds)
File "C:\Anaconda\lib\site-packages\pandas\io\parsers\base_parser.py", line 222, in _open_handles
self.handles = get_handle(
File "C:\Anaconda\lib\site-packages\pandas\io\common.py", line 702, in get_handle
handle = open(
FileNotFoundError: [Errno 2] No such file or directory: 'C:\Users\raman\MRQy-master\src\mrqy\UserInterface\Data\gbm_raw\results.tsv'

@Amir-Reza-Sadri
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According to the error: The input folder is empty or includes unsupported files format!

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