HISTORY.md

Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

Index

• Version 3
  • 3.9.x
  • 3.8.x
  • 3.7.x
  • 3.7.x
  • 3.6.x
  • 3.5.x
  • 3.4.x
  • 3.3.x
  • 3.2.x
  • 3.1.x
  • 3.0.x
• Version 2
  • 2.0.x
• Version 1
  • 1.0.x

caMicroscope Unreleased

TBD

caMicroscope 3.9.9

2021-11-08

• Fix and enhance Human Readable URL support

caMicroscope 3.9.10

2021-01-20

• Human Readable Urls for pathdb

caMicroscope 3.9.8

2021-10-21

• Add Segmentation -> Annotation Functionality #542
• Margin and Table UI Fixes #549 #551
• Add Pathdb Quad Lookup
• Add Docs link to landing
• retry slides one time if they have an error

caMicroscope 3.9.6

2021-08-05

• Some integration with the "Smartpen" concept #526, #532
• Preset label bugfix

caMicroscope 3.9.4

2021-06-16

• Github action for ci testing #514
• Bootstrap Upgrades #518, #519
• Migrate Additional Links to mongo from conf file
• Table Style Fix for large number of pages

caMicroscope 3.9.3

2021-04-15

• Bugfix for additional links url
• Additional links can launch with slide id

caMicroscope 3.9.2

2021-04-07

• Github action for ci testing #502
• Validate Emails on signup #501
• Image Enhancements #500
• Configurable Toolbar Links #511
• Documentation Improvements #506

caMicroscope 3.9.1

2021-03-05

• Bugfix: Annotation Name Filtering

caMicroscope 3.9.0

2021-03-04

• Asynchronous Layer Manager
• Auto convert png and jpg files via table load.
• Undo Draw Button #491
• Addition of screenshot feature to the viewer #496
• Table Button Responsiveness #477
• Improved Documentation #478, #488
• Tour, save state and resume #487
• Toolbar Dependency Bugfix #494

caMicroscope 3.8.4

2021-01-25

• Addition of a collection type, and related panel in table
• Google Drive Upload Support #467
• Upload process enhancement #463
• Table and Info page UI harmonization #464
• Footer Position Imrovements for Info and Table #475
• Add Login button to signup page #461
• Windows Lint Linebreak Fix #470
• Default Annotation Shape set to Polygon #466
• Heatmap Default Color Change to "Rainbow"

caMicroscope 3.8.3

2020-12-03

• Bugfix: Model Failed to read coordinates #454#455
• multislide explorer #456
• Model Class List Edit Field Defaults #457

caMicroscope 3.8.2

2020-11-10

• Add ctrl+l shortcut for label preset tool
• Annotation and Segmentation Rendering Optimizations
• Layer manager bugfixes

caMicroscope 3.8.1

2020-10-05

• Added baked-in default annotation schema
• Loader Bugfix

caMicroscope 3.8.0

2020-09-04

• Incorperation of the Machine Learning Development Workbench (GSOC 2020 @akhil-rana) #438
• Incorperation of the Automatic ROI Selector (GSOC 2020 @leoarc) #439
• Updated preset label tool
• Layer viewer usability optimizations
• Add the "coordinate" measurement style
• Treat the measurement tool as annotation
• UI Tweaks for better high-res screen support
• Softer warning popups
• Image Coordinate support
• Initial XML Annotation Converter

caMicroscope 3.7.7

2020-07-30

• Bugfix for Heatmap Color Editing

caMicroscope 3.7.6

2020-06-24

• Segmentation Fixes
• Review Status Workflow and Indicators #407
• Information Dashboard button moved to slides page #376

caMicroscope 3.7.5

2020-05-29

• Safer HTML in table (#401)

caMicroscope 3.7.4

2020-05-15

• Add download button to viewer (#392)
• Expand HISTORY.md (#396)
• Split out large JS sections from table and signup
• Move getUserPermissions to store

caMicroscope 3.7.3

2020-05-01

• Start this changelog.
• Use Friendlier Alerts in Viewer (#383)
• Batch Slide Loader (#385, #389)
• Filter Selector in Tables (#391)
• High-volume Render Optimization
• Temporarily Disabled Security Integration (#388)
• Readme Visual Documentation (#394)
• Details Button in Information Dashboard (#393)

caMicroscope 3.7.2

2020-04-17

• Documentation Improvements (#314, #315)
• User Creation Workflow (#371)
• Slide Deletion Workflow (#303, #367, #369)
• Table and Loader Improvements (#340, #345, #356, #358)
• Model and Segment App Improvements (#317, #375, #327, #330, #348, #351, #354, #360, #362, #382)
• Heatmap Color Changes (#322, #381)
• Viewer Tool Tour (#334)

caMicroscope 3.7.1

2020-04-03

• Bugfix: POST instead of UPDATE tables
• Sanitize user input (#301)
• Responsive tables (#306, #308)
• Style: camel case checks (#278)

caMicroscope 3.7.0

2020-04-02

• Use new backend (#291, camicroscope/Caracal)
• Adopted a code style guide (#270, #282, #281)
• Table/loader improvements (#273, #276)
• Faster UI transitions (#284, #288)
• Spyglass Behavior Improvements (#275, #297)

caMicroscope 3.6.2

2020-03-29

• Add Custom colors for heatmap (#253)
• Model Summary for Segmentation and Prediction Apps (#255, #250)
• Keyboard shortcut upgrades (#262, #265)
• Segmentation Memory Cleanup (#261)
• Edit Prediction Classes (#263)
• Loader Slide Name Checking (#266)
• Panel Text Wrapping (#264)
• Selector Fix (#260)

caMicroscope 3.6.1

2020-03-26

• Bugfix: Upload button with no slides (#249)
• Testing Updates
• UI Improvements (#256, #252, #251, #246)

caMicroscope 3.6.0

2020-03-22

• Removal of Package System (breaking) (#243)
• Table, Slide Loader, and Signup UX Improvements (#239, #241, #227, #226)
• Model Improvements (#223, #231)

caMicroscope 3.5.10

2019-11-13

• Bugfix: annotation wouldn't draw in certain contexts

caMicroscope 3.5.9

2019-11-11

• Configurable brush data
• Check pathdb for auth precheck before asking user to login

caMicroscope 3.5.8

2019-11-07

• Brush Improvements
• Heatmap Items
• User and time info in annots

caMicroscope 3.5.7

2019-10-30

• User Action Logging

caMicroscope 3.5.6

2019-10-24

• Heatmap and Labeling Option Additions

caMicroscope 3.5.2

2019-10-09

• Mpp and Delete Fixes; Drawing Indicator Box Style Change

caMicroscope 3.5.1

2019-09-10

• Pathdb Hotfix
• Some ml model tool updates

caMicroscope 3.4.3

2019-08-20

• Updated touch and zoom event fixes.

caMicroscope 3.4.2

2019-07-16

• Some mobile touch event support, if spotty.
• Changes to max zoom to avoid confusion

caMicroscope 3.4.1

2019-07-03

• Bufgix: Pathdb Store and Viewer Mode Toggle

caMicroscope 3.4.0

2019-06-22

• ML pathology in Browser
• Zoom and SBS customization
• Pathdb package simplification

caMicroscope 3.3.4

2019-06-03

• Heatmap View Integration, HeSep, and PathDB Field Changes

caMicroscope 3.3.3

2019-05-24

• Bugfix Release (Fuzz Numeric and 2.X style annot detail)

caMicroscope 3.3.2

2019-05-10

• H&E
• Bugfixes (pathdb home button, heatmap edit unset value, human annot view/pencil)

caMicroscope 3.3.1

2019-05-06

• Heatmap Editor (with Threshold)
• Login and auth check helpers
• Segmentation App Fixes
• Loader Improvements by @pranavbudhwant

caMicroscope 3.2.2

2019-04-02

• Segmentation App Fixes
• Default Packages "Map Warning" Fix

caMicroscope 3.2.1

2019-03-30

• Uncomment Segmentation/Counter App Button

caMicroscope 3.2.0

2019-03-30

• Heatmap and Cell Counter Support
• Pathdb integration

caMicroscope 3.1.1

2019-03-14

• Fix Table Js includes which were stopping the table from rendering.

caMicroscope 3.1.0

2019-03-11

• Add Heatmap Support
• Add Filterable Table

caMicroscope 3.0.0

2019-03-01

• Completely redesigned UI/UX
• Redesigned Data Model
• Package/Application/Extension Infrastructure
• Testing Protocol

caMicroscope 2.0.1

2018-05-25

caMicroscope 2.0

2018-05-18

caMicroscope 1.0

2017-06-27

• Tagging release branch as 1.0 per @tkurc @ U24 mtg 7/27/2017
• Dynamic services
• Better UI/colors for viewing annotations
• Disabled creation of annotations
• Viewing GEOJSON annotations in new UAIM3 format
• Creating Rectangles and FreeHand Polygons in UAIM3 format

Other Details

Refer to the release log.