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PopGenWithR

Collaboration Version of Population Genetics Text Book

Background

Over the past four years, I have been teaching a course in population genetics at Miami University; in so doing I have developed (and continue to develop) materials, written in RMarkdown, that are increasingly becoming the de facto text for the course. Rmd files for that effort are contained in this repository, along with a few associated files that are important for running these files. At present, knitted html is not included in the repo; this may change in the future.

Organization

The guts of the project are in the folder .Rmd; those files can be used, with minor editing to generate knitted files. One complication will be in the yaml code for the bibliography and css; at present they point to files on my local machine; I am working on finding the best way to include them in the repo (suggestions are welcome).

There are three other directory of note:

  1. RmdDevelopment contains very crude files, not yet ready for prime time.
  2. RmdProblems is a folder in which I will be including practice problems as I develop them.
  3. RmdChapters will include master files that can be used to generate chapter-length segments, which will incorporate material from multiple sources into single html files.

Contributing

I invite you to clone this repo and look it over. If you do,please let me know. I am still an amateur with github, but if you develop any enhancements or wish to make suggestions, I would welcome them. Please email me if you have questions or suggestions.

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Collaboration Version of Population Genetics Text Book

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