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Inter-modal registration: Use multi-contrast #127

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Lestropie opened this issue Mar 4, 2024 · 0 comments
Open

Inter-modal registration: Use multi-contrast #127

Lestropie opened this issue Mar 4, 2024 · 0 comments

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@Lestropie
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Currently, the code does the following:

  1. Generate pseudo-T1w image from b=0
  2. Generate pseudo-b=0 from T1w
  3. Register between DWI-pseudo-T1w and T1w
  4. Register between T1w-pseudo-b=0 and DWI b=0
  5. Average the results of 3 and 4

It only now occurs to me that this would probably be better handled using multi-contrast registration. Steps 3--5 could be done in a single mrregister call, by providing two volumes within each of the two inputs.

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