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Support for proportional venn diagrams? #5

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hvbakel opened this issue Feb 11, 2018 · 11 comments
Open

Support for proportional venn diagrams? #5

hvbakel opened this issue Feb 11, 2018 · 11 comments

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@hvbakel
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hvbakel commented Feb 11, 2018

Thanks for developing a really useful package for quickly intersecting genesets and regions. If possible, one nice addition would be to support scaling of the circles of the venn diagrams to be proportional to the size of the sets.

@asntech
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asntech commented Feb 28, 2018

Thanks @hvbakel for your interest in Intervene. We already have this option in the web version of the tool but we will consider to provide this with the command line too. Thanks!

@haskankaya
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haskankaya commented Aug 7, 2019

+1 on this.

Would be just as good to have option to output intersections to a .csv, and then upload this to the web version of the tool, similar to how it is possible with the UpSet and Pairwise modules.

Thanks for a great tool!

@bioinfouser
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+1 for this. Would be great if you could add the support to generate proportional venn diagrams.

@magruca
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magruca commented Sep 9, 2019

+1 as well. Very clean easy to use tool, so thank you for that!

@nam10san
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Thanks @hvbakel for your interest in Intervene. We already have this option in the web version of the tool but we will consider to provide this with the command line too. Thanks!

Did the proportional Venn diagram option come in hand for command line? That would be really a great addition for this tool.

@vschulz
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vschulz commented May 13, 2020

I didn't see how to use the web version to generate area proportional bed file intersection venn diagrams. How would this be done? I guess it would be possible to make named lists of regions using bedtools, but this is complicated because the regions in different samples have different extents, and making overlapping regions have the same names would be difficult.

@vojtace
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vojtace commented Jun 21, 2022

+1 for this. With it this tool would be perfect.

@perinom
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perinom commented Feb 11, 2023

Another +1 it would be great!

Love the tool, thanks!

@nibhelim
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nibhelim commented Apr 5, 2023

another +1 on this! we need it so much on the command line!!!

@asntech
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asntech commented Apr 7, 2023

This feature is almost ready and needs some testing. I'll try to get it soon, given the demand.
Thanks for using Intervene! :-)

@rikrdo89
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rikrdo89 commented Apr 9, 2023

One more +1 to implement this feature!

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