Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

I notice there is only instructions for a Linux Install, can I run this on my Windows laptop? #428

Closed
emilyrkang opened this issue Apr 18, 2024 · 1 comment

Comments

@emilyrkang
Copy link

OpenFold seems to be required for a different software I want to run: LigandMPNN, however it seems like there's an issue with my openfold install:

Programs\Python\Python310\lib\importlib_init_.py", line 126, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "C:\LigandMPNN\openfold\np\protein.py", line 23, in
from openfold.np import residue_constants
File "C:\LigandMPNN\openfold\np\residue_constants.py", line 24, in
import tree
ModuleNotFoundError: No module named 'tree'

@sachinkadyan7
Copy link
Collaborator

tree (or dm-tree) is a Python utility package we use to parse some dictionaries. Your error indicates that you don't have it installed. Make sure you go through the proper installation process, (environment.yml contains the software list and has dm-tree in the list) and you should get this package installed. Otherwise do:

pip install dm-tree

Other than that, in principle, you should be able to get this working on Windows too. Feel free to reopen if you face further issues.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants