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Hi, I am not sure if this is a bug or not but when I am using precompute_alignments_mmseqs.py to create an alignment for a single protein with ~300 amino acids it is taking ~24 minutes. The server this is running on has over 500G of RAM and 128 CPUs. I was under the impression that the mmseqs pipeline should be able to compute this alignment much faster. Do you have any guidance as to what is going on? Thanks!
The text was updated successfully, but these errors were encountered:
Hi, I am not sure if this is a bug or not but when I am using
precompute_alignments_mmseqs.py
to create an alignment for a single protein with ~300 amino acids it is taking ~24 minutes. The server this is running on has over 500G of RAM and 128 CPUs. I was under the impression that the mmseqs pipeline should be able to compute this alignment much faster. Do you have any guidance as to what is going on? Thanks!The text was updated successfully, but these errors were encountered: