Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Currently not using snakemake singularity functionality #1

Open
ataha24 opened this issue Jun 28, 2023 · 0 comments
Open

Currently not using snakemake singularity functionality #1

ataha24 opened this issue Jun 28, 2023 · 0 comments

Comments

@ataha24
Copy link
Collaborator

ataha24 commented Jun 28, 2023

Workflow eating up all memory during synthstrip step. Possibly due to really large singularity contrainer and incorrect usage of container smk functionality and resource allocation.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant