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DESCRIPTION
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DESCRIPTION
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Package: ReactomePA
Type: Package
Title: Reactome Pathway Analysis
Version: 1.49.0
Authors@R: c(person(given = "Guangchuang", family = "Yu",
email = "guangchuangyu@gmail.com",
role = c("aut", "cre")),
person(given = "Vladislav", family = "Petyuk",
email = "petyuk@gmail.com",
role = "ctb"))
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Description: This package provides functions for pathway analysis based on
REACTOME pathway database. It implements enrichment analysis, gene set
enrichment analysis and several functions for visualization.
This package is not affiliated with the Reactome team.
Depends:
R (>= 3.4.0)
Imports:
AnnotationDbi,
DOSE (>= 3.5.1),
enrichplot,
ggplot2 (>= 3.3.5),
ggraph,
reactome.db,
igraph,
graphite,
gson
Suggests:
BiocStyle,
clusterProfiler,
knitr,
rmarkdown,
org.Hs.eg.db,
prettydoc,
testthat
VignetteBuilder: knitr
ByteCompile: true
License: GPL-2
URL: https://yulab-smu.top/biomedical-knowledge-mining-book/
BugReports: https://github.com/GuangchuangYu/ReactomePA/issues
Packaged: 2012-03-05 18:26:53 UTC; mcarlson
biocViews: Pathways, Visualization, Annotation, MultipleComparison,
GeneSetEnrichment, Reactome
RoxygenNote: 7.3.0
Encoding: UTF-8