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README.txt
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README.txt
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#### Prepared on 07/14/2020 ###
This README file accompanies the following 17 files that contain GWAS summary statistics for 17 cancers based on a meta-analysis of the UK Biobank and GERA cohorts, as reported in Rashkin et al. (2020) bioRxiv 635367; doi: https://doi.org/10.1101/635367
Columns for each of the files listed above are as follows:
CHR: chromosome
BP: basepair position in hg19/build 37
uniqID: variant name
A1: effect allele
A2: other allele
N: number of studies (N=1 for variants in UKB or GERA only)
P: p-value (fixed effects meta-analysis)
P_random: p-value (random effects meta-analysis)
OR: odds ratio (fixed effects)
OR_random: odds ratio (random effects)
Q: p-value for Cochran’s Q heterogeneity test
I: I^2 heterogeneity index (0-100)
ID: variant name (rsID)
totN: sample size