Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Write more metadata #813

Open
zacsimile opened this issue Jan 28, 2024 · 1 comment
Open

Write more metadata #813

zacsimile opened this issue Jan 28, 2024 · 1 comment

Comments

@zacsimile
Copy link
Collaborator

When I set up metadata, I wrote in the minimum needed for proof of concept. There's lots of information available that we currently don't write to the image files (i.e. everything in experiment.yaml that isn't in the metadata). We need to port it into our metadata sources. Probably can just stash everything in an additional_metadata dictionary that gets parsed into XML, but I'm open to suggestions.

@AdvancedImagingUTSW
Copy link
Collaborator

Looking through metadata.py and I am not seeing the additional_metadata that you reference. Any chance you could provide a bit more information?

For reference, I was looking at the OME-TIFF and BDVReader specifications, here:
https://docs.openmicroscopy.org/ome-model/6.3.1/ome-tiff/specification.html
https://docs.openmicroscopy.org/bio-formats/6.5.1/metadata/BDVReader.html

Is this the same schema that you referenced? Because I also do not see additional_metadata there.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

When branches are created from issues, their pull requests are automatically linked.

2 participants