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README.md

mashtree container

Main tool: mashtree

Code repository: https://github.com/lskatz/mashtree

Additional tools:

mash: 2.3
quicktree: 2.5

Basic information on how to use this tool:

executable: mashtree
help: --help
description: Create a tree using Mash distances.

Full documentation: https://github.com/lskatz/mashtree

Example Usage

mashtree --numcpus 4 sample1.fasta sample2.fasta sample3.fasta --outtree mashtree.nwk